RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 KLC3Q6P597 504 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 PACS1Q6VY07 963 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 C9orf139Q6ZV77 190 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 DGLUCYQ7Z3D6 616 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 LONP2Q86WA8 852 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 CIARTQ8N365 385 aaPredicted RBP5.29□□□□□ -1.56
LINC00557-201ENST00000563184 L3MBTL4Q8NA19 623 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 XXYLT1Q8NBI6 393 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 TSPAN14Q8NG11 270 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 MOSPD2Q8NHP6 518 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 NXNL1Q96CM4 212 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 C17orf77Q96MU5 243 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 CTAGE1Q96RT6 745 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 BAG1Q99933 345 aaPredicted RBP5.29□□□□□ -1.56
LINC00557-201ENST00000563184 LRRC1Q9BTT6 524 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 ST6GALNAC4Q9H4F1 302 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 RABEP2Q9H5N1 569 aa5.29□□□□□ -1.56
LINC00557-201ENST00000563184 BCCIPQ9P287 314 aaKnown RBP eCLIP5.29□□□□□ -1.56
LINC00557-201ENST00000563184 DDX25Q9UHL0 483 aaKnown RBP5.29□□□□□ -1.56
LINC00557-201ENST00000563184 SPIN1Q9Y657 262 aaPredicted RBP5.29□□□□□ -1.56
LINC00557-201ENST00000563184 SMCHD1A6NHR9 2005 aa5.28□□□□□ -1.56
LINC00557-201ENST00000563184 LINGO3P0C6S8 592 aa5.28□□□□□ -1.56
LINC00557-201ENST00000563184 DANCRP0C864 163 aa5.28□□□□□ -1.56
LINC00557-201ENST00000563184 MYBL1P10243 752 aa5.28□□□□□ -1.56
LINC00557-201ENST00000563184 ACP2P11117 423 aa5.28□□□□□ -1.56
LINC00557-201ENST00000563184 PFKFB1P16118 471 aa5.28□□□□□ -1.56
LINC00557-201ENST00000563184 MBTD1Q05BQ5 628 aa5.28□□□□□ -1.56
LINC00557-201ENST00000563184 KLHL26Q53HC5 615 aa5.28□□□□□ -1.56
LINC00557-201ENST00000563184 WBP2NLQ6ICG8 309 aa5.28□□□□□ -1.56
LINC00557-201ENST00000563184 CRYBG2Q8N1P7 616 aa5.28□□□□□ -1.56
LINC00557-201ENST00000563184 RFLNBQ8N5W9 214 aa5.28□□□□□ -1.56
LINC00557-201ENST00000563184 RDM1Q8NG50 284 aa5.28□□□□□ -1.56
LINC00557-201ENST00000563184 OR6J1Q8NGC5 347 aa5.28□□□□□ -1.56
LINC00557-201ENST00000563184 ARSGQ96EG1 525 aa5.28□□□□□ -1.56
LINC00557-201ENST00000563184 CNDP2Q96KP4 475 aaKnown RBP5.28□□□□□ -1.56
LINC00557-201ENST00000563184 FNDC11Q9BVV2 318 aa5.28□□□□□ -1.56
LINC00557-201ENST00000563184 DONSONQ9NYP3 566 aa5.28□□□□□ -1.56
LINC00557-201ENST00000563184 CFDP1Q9UEE9 299 aaPredicted RBP5.28□□□□□ -1.56
LINC00557-201ENST00000563184 OSGIN1Q9UJX0 560 aa5.28□□□□□ -1.56
LINC00557-201ENST00000563184 ZNF580Q9UK33 172 aa5.28□□□□□ -1.56
LINC00557-201ENST00000563184 CCL27Q9Y4X3 112 aa5.28□□□□□ -1.56
LINC00557-201ENST00000563184 ELOVL7A1L3X0 281 aa5.27□□□□□ -1.57
LINC00557-201ENST00000563184 C16orf97H3BN30 126 aa5.27□□□□□ -1.57
LINC00557-201ENST00000563184 H7C0S8 307 aa5.27□□□□□ -1.57
LINC00557-201ENST00000563184 TCERG1O14776 1098 aaKnown RBP5.27□□□□□ -1.57
LINC00557-201ENST00000563184 CAPN9O14815 690 aa5.27□□□□□ -1.57
LINC00557-201ENST00000563184 BUB3O43684 328 aa5.27□□□□□ -1.57
LINC00557-201ENST00000563184 SYNCRIPO60506 623 aaKnown RBP5.27□□□□□ -1.57
LINC00557-201ENST00000563184 TGFB3P10600 412 aa5.27□□□□□ -1.57
LINC00557-201ENST00000563184 PSMC4P43686 418 aa5.27□□□□□ -1.57
LINC00557-201ENST00000563184 FMO5P49326 533 aa5.27□□□□□ -1.57
LINC00557-201ENST00000563184 RAD23AP54725 363 aa5.27□□□□□ -1.57
LINC00557-201ENST00000563184 CSE1LP55060 971 aaKnown RBP5.27□□□□□ -1.57
LINC00557-201ENST00000563184 GAGE5Q13069 117 aa5.27□□□□□ -1.57
LINC00557-201ENST00000563184 GAGE6Q13070 117 aa5.27□□□□□ -1.57
LINC00557-201ENST00000563184 DUOXA1Q1HG43 343 aa5.27□□□□□ -1.57
LINC00557-201ENST00000563184 EXOC3L1Q86VI1 746 aa5.27□□□□□ -1.57
LINC00557-201ENST00000563184 EXD1Q8NHP7 514 aa5.27□□□□□ -1.57
LINC00557-201ENST00000563184 CD101Q93033 1021 aa5.27□□□□□ -1.57
LINC00557-201ENST00000563184 SECISBP2LQ93073 1101 aaKnown RBP5.27□□□□□ -1.57
LINC00557-201ENST00000563184 SPDL1Q96EA4 605 aa5.27□□□□□ -1.57
LINC00557-201ENST00000563184 NOL11Q9H8H0 719 aaKnown RBP5.27□□□□□ -1.57
LINC00557-201ENST00000563184 CNOT10Q9H9A5 744 aaKnown RBP5.27□□□□□ -1.57
LINC00557-201ENST00000563184 ACKR4Q9NPB9 350 aa5.27□□□□□ -1.57
LINC00557-201ENST00000563184 TUBE1Q9UJT0 475 aa5.27□□□□□ -1.57
LINC00557-201ENST00000563184 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.27□□□□□ -1.57
LINC00557-201ENST00000563184 SOS1Q07889 1333 aaPredicted RBP5.26□□□□□ -1.57
LINC00557-201ENST00000563184 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 EDDM13A0A1B0GTR0 161 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 A0A1W2PPI3 338 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 XPNPEP2O43895 674 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 GGPS1O95749 300 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 F7P08709 466 aaPredicted RBP5.26□□□□□ -1.57
LINC00557-201ENST00000563184 OR2T7P0C7T2 308 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 CKMT2P17540 419 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 MARK3P27448 753 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 EEF1DP29692 281 aaKnown RBP5.26□□□□□ -1.57
LINC00557-201ENST00000563184 THOP1P52888 689 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 GAS1P54826 345 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 DLX5P56178 289 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 ARL16Q0P5N6 197 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 MFAP5Q13361 173 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 KIR2DS3Q14952 304 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 TCP11X2Q5H9J9 407 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 FAM76BQ5HYJ3 339 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 C1orf141Q5JVX7 400 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 RUSC1-AS1Q66K80 236 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 KRT80Q6KB66 452 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 FAM198BQ6UWH4 519 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 LINGO4Q6UY18 593 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 TMPRSS11FQ6ZWK6 438 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 SMIM29Q86T20 159 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 IQCHQ86VS3 1027 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 FAM114A1Q8IWE2 563 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 MAB21L3Q8N8X9 362 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 Q8NFD4 153 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 SLC24A4Q8NFF2 622 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 OR5M8Q8NGP6 311 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 OR13A1Q8NGR1 328 aa5.26□□□□□ -1.57
LINC00557-201ENST00000563184 VPS33AQ96AX1 596 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms