RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 MAPKAPK3Q16644 382 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 RFTN2Q52LD8 501 aaPredicted RBP12.86□□□□□ -0.35
USB1-207ENST00000563149 INO80DQ53TQ3 878 aaPredicted RBP12.86□□□□□ -0.35
USB1-207ENST00000563149 FGD3Q5JSP0 725 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 CACHD1Q5VU97 1274 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 LYPLAL1Q5VWZ2 237 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 ANKRD26P1Q6NSI1 321 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 ITIH5Q86UX2 942 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 ZNF548Q8NEK5 533 aaPredicted RBP12.86□□□□□ -0.35
USB1-207ENST00000563149 DDHD1Q8NEL9 900 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 GTF2H4Q92759 462 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 ACDQ96AP0 544 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 DPY30Q9C005 99 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 SOX17Q9H6I2 414 aaPredicted RBP12.86□□□□□ -0.35
USB1-207ENST00000563149 FANCEQ9HB96 536 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 BPIFA1Q9NP55 256 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 FAM118AQ9NWS6 357 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 TRPS1Q9UHF7 1281 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 ADGRE2Q9UHX3 823 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 GNPTGQ9UJJ9 305 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 V9GYQ6 96 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 CBX4O00257 560 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 RSL1D1O76021 490 aaKnown RBP12.86□□□□□ -0.35
USB1-207ENST00000563149 CST1P01037 141 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 RETP07949 1114 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 MATN1P21941 496 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 DGKAP23743 735 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 SOX11P35716 441 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 HMGCLP35914 325 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 DGKQP52824 942 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 FCGRTP55899 365 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 RFX4Q33E94 735 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 ZIK1Q3SY52 487 aaPredicted RBP12.86□□□□□ -0.35
USB1-207ENST00000563149 RUNDC3AQ59EK9 446 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 HABP4Q5JVS0 413 aaKnown RBP12.86□□□□□ -0.35
USB1-207ENST00000563149 HECTD3Q5T447 861 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 ATG9BQ674R7 924 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 PTRHD1Q6GMV3 140 aaKnown RBP12.86□□□□□ -0.35
USB1-207ENST00000563149 TTC23LQ6PF05 361 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 TRAF7Q6Q0C0 670 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 ANKS3Q6ZW76 656 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 TRIM46Q7Z4K8 759 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 DENND1CQ8IV53 801 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 ADHFE1Q8IWW8 467 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 RBM12BQ8IXT5 1001 aaKnown RBP12.86□□□□□ -0.35
USB1-207ENST00000563149 OR5K1Q8NHB7 308 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 SLC22A17Q8WUG5 538 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 UBTD2Q8WUN7 234 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 TRUB1Q8WWH5 349 aaKnown RBP12.86□□□□□ -0.35
USB1-207ENST00000563149 SLC47A1Q96FL8 570 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 GLT1D1Q96MS3 346 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 NTMT1Q9BV86 223 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 NACA2Q9H009 215 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 CLPBQ9H078 707 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 TOR3AQ9H497 397 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 VAPAQ9P0L0 249 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 PSME2Q9UL46 239 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 ANGPTL3Q9Y5C1 460 aa12.86□□□□□ -0.35
USB1-207ENST00000563149 TAPBPO15533 448 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 DFNA5O60443 496 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 BCL10O95999 233 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 CNPP09543 421 aaKnown RBP12.85□□□□□ -0.35
USB1-207ENST00000563149 EBLN1P0CF75 366 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 POLR2IP36954 125 aaKnown RBP12.85□□□□□ -0.35
USB1-207ENST00000563149 GNPDA1P46926 289 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 YAP1P46937 504 aaKnown RBP12.85□□□□□ -0.35
USB1-207ENST00000563149 ARF5P84085 180 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 PPP2R2BQ00005 443 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 IL18R1Q13478 541 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 SPIDRQ14159 915 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 C6orf141Q5SZD1 244 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 RNF219Q5W0B1 726 aaPredicted RBP12.85□□□□□ -0.35
USB1-207ENST00000563149 CST9Q5W186 159 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 XAF1Q6GPH4 301 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 FUT10Q6P4F1 479 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 ABI1Q8IZP0 508 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 FAM9CQ8IZT9 166 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 RBFAQ8N0V3 343 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 DCBLD1Q8N8Z6 715 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 GIPC3Q8TF64 312 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 SNX19Q92543 992 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 FIG4Q92562 907 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 ITFG2Q969R8 447 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 PLEKHA8Q96JA3 519 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 COX4I2Q96KJ9 171 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 SMIM14Q96QK8 99 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 THUMPD3Q9BV44 507 aaKnown RBP12.85□□□□□ -0.35
USB1-207ENST00000563149 GPR63Q9BZJ6 419 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 CD244Q9BZW8 370 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 NAA50Q9GZZ1 169 aaKnown RBP12.85□□□□□ -0.35
USB1-207ENST00000563149 RDH14Q9HBH5 336 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.85□□□□□ -0.35
USB1-207ENST00000563149 LIMD1Q9UGP4 676 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 C3orf18Q9UK00 162 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 B3GNT3Q9Y2A9 372 aa12.85□□□□□ -0.35
USB1-207ENST00000563149 IQCF5A8MTL0 148 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 FAM220BPB1ANY3 271 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 CXCR6O00574 342 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 GNGT2O14610 69 aa12.84□□□□□ -0.35
USB1-207ENST00000563149 ERN1O75460 977 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms