RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 MOCS1Q9NZB8 636 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 CDYLQ9Y232 598 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 ESR1P03372 595 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 GSTM1P09488 218 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 PKMP14618 531 aaKnown RBP17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 CHRM3P20309 590 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 GPR3P46089 330 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 LEPRP48357 1165 aaKnown RBP17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 ADARP55265 1226 aaKnown RBP17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 GSTM4Q03013 218 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 SPIDRQ14159 915 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 SYTL3Q4VX76 610 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 UBAP2Q5T6F2 1119 aaKnown RBP17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 B3GNT8Q7Z7M8 397 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 TMPRSS12Q86WS5 348 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 LMNTD2Q8IXW0 634 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 COL27A1Q8IZC6 1860 aaPredicted RBP17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 GFM1Q96RP9 751 aaKnown RBP17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 SLC30A3Q99726 388 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 NUDT22Q9BRQ3 303 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 CLCA2Q9UQC9 943 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 MED16Q9Y2X0 877 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 PCDHB1Q9Y5F3 818 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 PSAT1Q9Y617 370 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 AKAP13Q12802 2813 aa17.04■□□□□ 0.32
CCNDBP1-204ENST00000563065 ASPMQ8IZT6 3477 aa17.04■□□□□ 0.32
CCNDBP1-204ENST00000563065 AGRPO00253 132 aa17.04■□□□□ 0.32
CCNDBP1-204ENST00000563065 GPC4O75487 556 aa17.04■□□□□ 0.32
CCNDBP1-204ENST00000563065 HOXB3P14651 431 aaPredicted RBP17.04■□□□□ 0.32
CCNDBP1-204ENST00000563065 MPSTP25325 297 aa17.04■□□□□ 0.32
CCNDBP1-204ENST00000563065 PPM1FP49593 454 aaPredicted RBP17.04■□□□□ 0.32
CCNDBP1-204ENST00000563065 PDX1P52945 283 aa17.04■□□□□ 0.32
CCNDBP1-204ENST00000563065 RPA4Q13156 261 aa17.04■□□□□ 0.32
CCNDBP1-204ENST00000563065 FRG1Q14331 258 aaKnown RBP17.04■□□□□ 0.32
CCNDBP1-204ENST00000563065 C3orf62Q6ZUJ4 267 aa17.04■□□□□ 0.32
CCNDBP1-204ENST00000563065 TMEM159Q96B96 161 aa17.04■□□□□ 0.32
CCNDBP1-204ENST00000563065 PANX3Q96QZ0 392 aa17.04■□□□□ 0.32
CCNDBP1-204ENST00000563065 FERD3LQ96RJ6 166 aa17.04■□□□□ 0.32
CCNDBP1-204ENST00000563065 NDNQ99608 321 aa17.04■□□□□ 0.32
CCNDBP1-204ENST00000563065 TSSK1BQ9BXA7 367 aa17.04■□□□□ 0.32
CCNDBP1-204ENST00000563065 FOXP3Q9BZS1 431 aa17.04■□□□□ 0.32
CCNDBP1-204ENST00000563065 STN1Q9H668 368 aaKnown RBP17.04■□□□□ 0.32
CCNDBP1-204ENST00000563065 LRRC4CQ9HCJ2 640 aa17.04■□□□□ 0.32
CCNDBP1-204ENST00000563065 POT1Q9NUX5 634 aa17.04■□□□□ 0.32
CCNDBP1-204ENST00000563065 TMEM9Q9P0T7 183 aa17.04■□□□□ 0.32
CCNDBP1-204ENST00000563065 TSR3Q9UJK0 312 aaKnown RBP17.04■□□□□ 0.32
CCNDBP1-204ENST00000563065 VPS9D1Q9Y2B5 631 aa17.04■□□□□ 0.32
CCNDBP1-204ENST00000563065 WDFY3Q8IZQ1 3526 aa17.03■□□□□ 0.32
CCNDBP1-204ENST00000563065 CXorf49A8MYA2 514 aaPredicted RBP17.03■□□□□ 0.32
CCNDBP1-204ENST00000563065 F8W8V4 182 aa17.03■□□□□ 0.32
CCNDBP1-204ENST00000563065 TYRP1P17643 537 aa17.03■□□□□ 0.32
CCNDBP1-204ENST00000563065 ACADLP28330 430 aa17.03■□□□□ 0.32
CCNDBP1-204ENST00000563065 CSF2RBP32927 897 aa17.03■□□□□ 0.32
CCNDBP1-204ENST00000563065 PGGT1BP53609 377 aa17.03■□□□□ 0.32
CCNDBP1-204ENST00000563065 MGAT5Q09328 741 aa17.03■□□□□ 0.32
CCNDBP1-204ENST00000563065 ABRQ12979 859 aa17.03■□□□□ 0.32
CCNDBP1-204ENST00000563065 PRKG2Q13237 762 aa17.03■□□□□ 0.32
CCNDBP1-204ENST00000563065 TEX35Q5T0J7 233 aa17.03■□□□□ 0.32
CCNDBP1-204ENST00000563065 RBM20Q5T481 1227 aaKnown RBP17.03■□□□□ 0.32
CCNDBP1-204ENST00000563065 ZNF449Q6P9G9 518 aa17.03■□□□□ 0.32
CCNDBP1-204ENST00000563065 ZNF574Q6ZN55 896 aaPredicted RBP17.03■□□□□ 0.32
CCNDBP1-204ENST00000563065 OTOAQ7RTW8 1153 aa17.03■□□□□ 0.32
CCNDBP1-204ENST00000563065 PDZD3Q86UT5 571 aa17.03■□□□□ 0.32
CCNDBP1-204ENST00000563065 GALNT15Q8N3T1 639 aa17.03■□□□□ 0.32
CCNDBP1-204ENST00000563065 DCBLD1Q8N8Z6 715 aa17.03■□□□□ 0.32
CCNDBP1-204ENST00000563065 SIDT2Q8NBJ9 832 aaKnown RBP17.03■□□□□ 0.32
CCNDBP1-204ENST00000563065 TFGQ92734 400 aaPredicted RBP17.03■□□□□ 0.32
CCNDBP1-204ENST00000563065 SH3KBP1Q96B97 665 aa17.03■□□□□ 0.32
CCNDBP1-204ENST00000563065 OGFRQ9NZT2 677 aa17.03■□□□□ 0.32
CCNDBP1-204ENST00000563065 TCRBV9S1A1TA0A576 114 aa17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 D6RAR5 112 aa17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 IFRD1O00458 451 aaPredicted RBP17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 CSO75390 466 aaKnown RBP17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 APOA4P06727 396 aa17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 CD151P48509 253 aa17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 CLCN7P51798 805 aa17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 TIAL1Q01085 375 aaKnown RBP eCLIP17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 KRT33BQ14525 404 aa17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 KYNUQ16719 465 aa17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 CCNI2Q6ZMN8 369 aaPredicted RBP17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 RBM44Q6ZP01 1051 aaKnown RBP17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 SLC22A15Q8IZD6 547 aa17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 OR5AR1Q8NGP9 310 aa17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 CFAP61Q8NHU2 1237 aa17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 GIMAP7Q8NHV1 300 aa17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 ASZ1Q8WWH4 475 aa17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 NCSTNQ92542 709 aa17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 ATXN7L3BQ96GX2 97 aa17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 AHCYL2Q96HN2 611 aaKnown RBP17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 AARSD1Q9BTE6 412 aaKnown RBP17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 PHACTR1Q9C0D0 580 aa17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 SEMA6CQ9H3T2 930 aa17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 ZFATQ9P243 1243 aa17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 NFU1Q9UMS0 254 aa17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 RUVBL2Q9Y230 463 aaKnown RBP17.02■□□□□ 0.32
CCNDBP1-204ENST00000563065 FRYQ5TBA9 3013 aa17.01■□□□□ 0.31
CCNDBP1-204ENST00000563065 LILRA5A6NI73 299 aa17.01■□□□□ 0.31
CCNDBP1-204ENST00000563065 E5RI56 91 aa17.01■□□□□ 0.31
CCNDBP1-204ENST00000563065 H3BMM5 538 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms