RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 EFCAB9A8MZ26 197 aa13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 KCNK1O00180 336 aa13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 MYCP01106 439 aaPredicted RBP13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 UMPSP11172 480 aa13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 ITGB6P18564 788 aa13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 GPX3P22352 226 aa13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 CBLP22681 906 aa13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 IL32P24001 234 aa13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 ACVR2AP27037 513 aa13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 NOS2P35228 1153 aa13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 SERPINH1P50454 418 aaKnown RBP13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 AP2S1P53680 142 aaPredicted RBP13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 EIF2B5Q13144 721 aaKnown RBP13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 TARDBPQ13148 414 aaKnown RBP eCLIP13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 UGT3A2Q3SY77 523 aa13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 FUT11Q495W5 492 aa13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 SMYD5Q6GMV2 418 aa13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 CLYBLQ8N0X4 340 aa13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 C8orf48Q96LL4 319 aa13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 MBOAT4Q96T53 435 aa13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 NPY6RQ99463 290 aa13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 ZBTB20Q9HC78 741 aaPredicted RBP13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 TAS2R9Q9NYW1 312 aa13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 USP22Q9UPT9 525 aa13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 USP3Q9Y6I4 520 aa13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 BPTFQ12830 3046 aa13.83□□□□□ -0.2
GTF3C1-203ENST00000562609 GPR182O15218 404 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 ALDOCP09972 364 aaKnown RBP13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 ST13P50502 369 aaKnown RBP13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 ARPP19P56211 112 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 LIPEQ05469 1076 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 MGAT3Q09327 533 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 CLCA4Q14CN2 919 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 VARS2Q5ST30 1063 aaKnown RBP13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 ANKRD34AQ69YU3 496 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 CNIH3Q8TBE1 160 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 PHOX2BQ99453 314 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 RTP3Q9BQQ7 232 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 ACAT2Q9BWD1 397 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 ZCWPW2A0A1B0GU75 182 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 TMEM88BA6NKF7 163 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 ENPP3O14638 875 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 OR4Q2P0C623 313 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 UQCRC1P31930 480 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 APLP1P51693 650 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 ISL1P61371 349 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 KCNAB2Q13303 367 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 CLEC6AQ6EIG7 209 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 LRRTM3Q86VH5 581 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 KCNMB4Q86W47 210 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 ZDHHC13Q8IUH4 622 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 SCAMP5Q8TAC9 235 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 BPIFB1Q8TDL5 484 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 MYLPFQ96A32 169 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 NUAK2Q9H093 628 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 DDIT4Q9NX09 232 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 EHD3Q9NZN3 535 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 METTL15A6NJ78 407 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 CTDSP2O14595 271 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 CLK1P49759 484 aaKnown RBP13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 DAOAP59103 153 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 ZNF45Q02386 682 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 GALNT3Q14435 633 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 BCL7AQ4VC05 210 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 GALNT7Q86SF2 657 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 CUZD1Q86UP6 607 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 SLC41A1Q8IVJ1 513 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 MICU2Q8IYU8 434 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 HS3ST5Q8IZT8 346 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 KIAA1958Q8N8K9 716 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 FYTTD1Q96QD9 318 aaKnown RBP13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 PRDM12Q9H4Q4 367 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 KAT8Q9H7Z6 458 aaKnown RBP13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 PCDHGB6Q9Y5F9 930 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 PCDHGB1Q9Y5G3 927 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 PCDHA9Q9Y5H5 950 aa13.82□□□□□ -0.2
GTF3C1-203ENST00000562609 H3BUI4 141 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 TRIM77I1YAP6 450 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 B4GALT3O60512 393 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 KPNA6O60684 536 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 CD6P30203 668 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 LHX1P48742 406 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 PSMD5Q16401 504 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 CES5AQ6NT32 575 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 ZNF517Q6ZMY9 492 aaPredicted RBP13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 DPF3Q92784 378 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 TMEM125Q96AQ2 219 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 RIPOR3Q96MK2 946 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 GPR22Q99680 433 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 ZSCAN5AQ9BUG6 496 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 TM9SF3Q9HD45 589 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 RANGRFQ9HD47 186 aaPredicted RBP13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 ENTPD7Q9NQZ7 604 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 C14orf119Q9NWQ9 140 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 STAP1Q9ULZ2 295 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 BTBD3Q9Y2F9 522 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 ACOT9Q9Y305 439 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 PCDHGA10Q9Y5H3 936 aa13.81□□□□□ -0.2
GTF3C1-203ENST00000562609 G3V2T6 193 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms