RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 FAM136AQ96C01 138 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 ATXN7L3BQ96GX2 97 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 PWWP2AQ96N64 755 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 CMKLR1Q99788 373 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 L2HGDHQ9H9P8 463 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 GRHL1Q9NZI5 618 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 IL1RAPL1Q9NZN1 696 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.48□□□□□ -0.73
TPM1-229ENST00000561242 MARCH4Q9P2E8 410 aaPredicted RBP10.48□□□□□ -0.73
TPM1-229ENST00000561242 KLHL42Q9P2K6 505 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 SLC23A2Q9UGH3 650 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 DMGDHQ9UI17 866 aaKnown RBP10.48□□□□□ -0.73
TPM1-229ENST00000561242 TSR3Q9UJK0 312 aaKnown RBP10.48□□□□□ -0.73
TPM1-229ENST00000561242 TMPRSS11EQ9UL52 423 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 VWA7Q9Y334 891 aa10.48□□□□□ -0.73
TPM1-229ENST00000561242 TRPM6Q9BX84 2022 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 GSAPA4D1B5 854 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 OR52A4PA6NMU1 304 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 IQCF5A8MTL0 148 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 POC1B-GALNT4F8VUJ3 575 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 KRT37O76014 449 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 HAUS5O94927 633 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 ACSL3O95573 720 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 S1PR4O95977 384 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 PROS1P07225 676 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 JMJD7P0C870 316 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 MYF5P13349 255 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 SHMT2P34897 504 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 FASLGP48023 281 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 PREPP48147 710 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 SERPINB9P50453 376 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 INHBCP55103 352 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 OR1D5P58170 312 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 CCL7P80098 99 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 MPP1Q00013 466 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 KYNUQ16719 465 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 TAF1BQ53T94 588 aaPredicted RBP10.47□□□□□ -0.73
TPM1-229ENST00000561242 N4BP2L1Q5TBK1 243 aaPredicted RBP10.47□□□□□ -0.73
TPM1-229ENST00000561242 IRGCQ6NXR0 463 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 UNC5DQ6UXZ4 953 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 USP53Q70EK8 1073 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 CYS1Q717R9 158 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 KANSL1Q7Z3B3 1105 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 TBC1D1Q86TI0 1168 aaPredicted RBP10.47□□□□□ -0.73
TPM1-229ENST00000561242 PDZD3Q86UT5 571 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 ZNF547Q8IVP9 402 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 LSMEM2Q8N112 164 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 NAGSQ8N159 534 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 ADAMTS14Q8WXS8 1223 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 LPGAT1Q92604 370 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 AARSD1Q9BTE6 412 aaKnown RBP10.47□□□□□ -0.73
TPM1-229ENST00000561242 SLC7A5P2Q9GIP4 190 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 UCK1Q9HA47 277 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 FANCEQ9HB96 536 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 INTS7Q9NVH2 962 aaKnown RBP10.47□□□□□ -0.73
TPM1-229ENST00000561242 HRASLS2Q9NWW9 162 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 IRAK4Q9NWZ3 460 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 CFAP20Q9Y6A4 193 aaKnown RBP10.47□□□□□ -0.73
TPM1-229ENST00000561242 PRSS21Q9Y6M0 314 aa10.47□□□□□ -0.73
TPM1-229ENST00000561242 VCANP13611 3396 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 EXOC1LA0A1B0GW35 172 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 FAM95CA0A1B0GW59 222 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 LILRA5A6NI73 299 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 ISM1B1AKI9 464 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 EIF3FO00303 357 aaPredicted RBP10.46□□□□□ -0.73
TPM1-229ENST00000561242 TM4SF5O14894 197 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 GIPC1O14908 333 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 NOBOXO60393 691 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 AHSGP02765 367 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 STMN1P16949 149 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 TYRP1P17643 537 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 AOAHP28039 575 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 CCR7P32248 378 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 KPNA2P52292 529 aaKnown RBP10.46□□□□□ -0.73
TPM1-229ENST00000561242 B4GALNT1Q00973 533 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 POU4F1Q01851 419 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 PRKG2Q13237 762 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 EIF3IQ13347 325 aaKnown RBP10.46□□□□□ -0.73
TPM1-229ENST00000561242 NAA25Q14CX7 972 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 THEMIS2Q5TEJ8 643 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 HES3Q5TGS1 186 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 HECTD2Q5U5R9 776 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 STEAP4Q687X5 459 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 CNSTQ6PJW8 725 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 CCDC91Q7Z6B0 441 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 GALNT7Q86SF2 657 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 AMIGO1Q86WK6 493 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 DCUN1D3Q8IWE4 304 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 CHCHD4Q8N4Q1 142 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 OR4E2Q8NGC2 313 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 INSM2Q96T92 566 aaPredicted RBP10.46□□□□□ -0.73
TPM1-229ENST00000561242 HGH1Q9BTY7 390 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 RHOJQ9H4E5 214 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 KLHL3Q9UH77 587 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 ANGPTL2Q9UKU9 493 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 PNMA8BQ9ULN7 279 aaPredicted RBP10.46□□□□□ -0.73
TPM1-229ENST00000561242 DHRS7Q9Y394 339 aa10.46□□□□□ -0.73
TPM1-229ENST00000561242 IQANK1A0A1B0GTG1 560 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 TCRBV9S1A1TA0A576 114 aa10.45□□□□□ -0.74
TPM1-229ENST00000561242 FAM221BA6H8Z2 402 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms