RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 SPOCD1Q6ZMY3 1216 aa18■□□□□ 0.47
TPM1-226ENST00000560959 CUZD1Q86UP6 607 aa18■□□□□ 0.47
TPM1-226ENST00000560959 KCNMB4Q86W47 210 aa18■□□□□ 0.47
TPM1-226ENST00000560959 PLD5Q8N7P1 536 aa18■□□□□ 0.47
TPM1-226ENST00000560959 OR4E2Q8NGC2 313 aa18■□□□□ 0.47
TPM1-226ENST00000560959 NACC2Q96BF6 587 aa18■□□□□ 0.47
TPM1-226ENST00000560959 LINC00615Q96LM1 132 aaPredicted RBP18■□□□□ 0.47
TPM1-226ENST00000560959 CCM2Q9BSQ5 444 aa18■□□□□ 0.47
TPM1-226ENST00000560959 PITPNM3Q9BZ71 974 aa18■□□□□ 0.47
TPM1-226ENST00000560959 UGT1A7Q9HAW7 530 aa18■□□□□ 0.47
TPM1-226ENST00000560959 UGT1A10Q9HAW8 530 aa18■□□□□ 0.47
TPM1-226ENST00000560959 UGT1A8Q9HAW9 530 aa18■□□□□ 0.47
TPM1-226ENST00000560959 HACD3Q9P035 362 aa18■□□□□ 0.47
TPM1-226ENST00000560959 NTNG1Q9Y2I2 539 aa18■□□□□ 0.47
TPM1-226ENST00000560959 F5H423 210 aaPredicted RBP17.99■□□□□ 0.47
TPM1-226ENST00000560959 LRRTM2O43300 516 aa17.99■□□□□ 0.47
TPM1-226ENST00000560959 ZNF749O43361 778 aa17.99■□□□□ 0.47
TPM1-226ENST00000560959 PROSCO94903 275 aa17.99■□□□□ 0.47
TPM1-226ENST00000560959 KDELR1P24390 212 aa17.99■□□□□ 0.47
TPM1-226ENST00000560959 PRDX3P30048 256 aaKnown RBP17.99■□□□□ 0.47
TPM1-226ENST00000560959 GJC1P36383 396 aa17.99■□□□□ 0.47
TPM1-226ENST00000560959 PPP2R5EQ16537 467 aa17.99■□□□□ 0.47
TPM1-226ENST00000560959 ACVR1CQ8NER5 493 aa17.99■□□□□ 0.47
TPM1-226ENST00000560959 SPATA22Q8NHS9 363 aa17.99■□□□□ 0.47
TPM1-226ENST00000560959 SYN2Q92777 582 aaPredicted RBP17.99■□□□□ 0.47
TPM1-226ENST00000560959 GLOD4Q9HC38 313 aa17.99■□□□□ 0.47
TPM1-226ENST00000560959 HEY1Q9Y5J3 304 aa17.99■□□□□ 0.47
TPM1-226ENST00000560959 AP1M2Q9Y6Q5 423 aa17.99■□□□□ 0.47
TPM1-226ENST00000560959 GLYATL1P3A0A0U1RQE8 302 aa17.98■□□□□ 0.47
TPM1-226ENST00000560959 PPP1R12AO14974 1030 aaPredicted RBP17.98■□□□□ 0.47
TPM1-226ENST00000560959 SLC35G4P0C7Q5 338 aa17.98■□□□□ 0.47
TPM1-226ENST00000560959 MSH3P20585 1137 aa17.98■□□□□ 0.47
TPM1-226ENST00000560959 TAS2R40P59535 323 aa17.98■□□□□ 0.47
TPM1-226ENST00000560959 FNBP1LQ5T0N5 605 aa17.98■□□□□ 0.47
TPM1-226ENST00000560959 SLC9A4Q6AI14 798 aa17.98■□□□□ 0.47
TPM1-226ENST00000560959 OLFM3Q96PB7 478 aa17.98■□□□□ 0.47
TPM1-226ENST00000560959 CEP41Q9BYV8 373 aa17.98■□□□□ 0.47
TPM1-226ENST00000560959 SRMSQ9H3Y6 488 aa17.98■□□□□ 0.47
TPM1-226ENST00000560959 ATP13A2Q9NQ11 1180 aa17.98■□□□□ 0.47
TPM1-226ENST00000560959 LMBRD1Q9NUN5 540 aa17.98■□□□□ 0.47
TPM1-226ENST00000560959 P4HTMQ9NXG6 502 aa17.98■□□□□ 0.47
TPM1-226ENST00000560959 PCSK5Q92824 1860 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 A0A0A6YYK5 440 aaPredicted RBP17.97■□□□□ 0.47
TPM1-226ENST00000560959 LDB2O43679 373 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 PMPCBO75439 489 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 EDN3P14138 238 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 ST6GAL1P15907 406 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 ZFXP17010 805 aaPredicted RBP17.97■□□□□ 0.47
TPM1-226ENST00000560959 HNRNPH3P31942 346 aaKnown RBP17.97■□□□□ 0.47
TPM1-226ENST00000560959 ARCN1P48444 511 aaKnown RBP17.97■□□□□ 0.47
TPM1-226ENST00000560959 KRT33BQ14525 404 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 GSE1Q14687 1217 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 LLGL1Q15334 1064 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 BCL7AQ4VC05 210 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 RHBDD2Q6NTF9 364 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 DUS1LQ6P1R4 473 aaKnown RBP17.97■□□□□ 0.47
TPM1-226ENST00000560959 FAM151BQ6UXP7 276 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 CLEC17AQ6ZS10 378 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 B4GALNT4Q76KP1 1039 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 GPR135Q8IZ08 494 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 SPDYE1Q8NFV5 336 aaPredicted RBP17.97■□□□□ 0.47
TPM1-226ENST00000560959 OR2Y1Q8NGV0 311 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 PROKR1Q8TCW9 393 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 PPP4R1Q8TF05 950 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 LCN9Q8WX39 176 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 RAPGEF5Q92565 580 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 PTERQ96BW5 349 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 TEKT5Q96M29 485 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 TRAPPC9Q96Q05 1148 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 WDR77Q9BQA1 342 aaPredicted RBP17.97■□□□□ 0.47
TPM1-226ENST00000560959 CHRNA10Q9GZZ6 450 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 TFB2MQ9H5Q4 396 aaKnown RBP17.97■□□□□ 0.47
TPM1-226ENST00000560959 UVRAGQ9P2Y5 699 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 FAM153AQ9UHL3 310 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 PKP3Q9Y446 797 aa17.97■□□□□ 0.47
TPM1-226ENST00000560959 SPTBP11277 2137 aa17.96■□□□□ 0.47
TPM1-226ENST00000560959 PIKFYVEQ9Y2I7 2098 aa17.96■□□□□ 0.47
TPM1-226ENST00000560959 A0A1B0GUH1 482 aa17.96■□□□□ 0.47
TPM1-226ENST00000560959 ARHGAP10A1A4S6 786 aa17.96■□□□□ 0.47
TPM1-226ENST00000560959 GAPDHSO14556 408 aaPredicted RBP17.96■□□□□ 0.47
TPM1-226ENST00000560959 PBLDP30039 288 aaPredicted RBP17.96■□□□□ 0.47
TPM1-226ENST00000560959 FOLR3P41439 243 aa17.96■□□□□ 0.47
TPM1-226ENST00000560959 TSFMP43897 325 aaKnown RBP17.96■□□□□ 0.47
TPM1-226ENST00000560959 AIMP2Q13155 320 aaKnown RBP17.96■□□□□ 0.47
TPM1-226ENST00000560959 MLIPQ5VWP3 458 aa17.96■□□□□ 0.47
TPM1-226ENST00000560959 ALKBH5Q6P6C2 394 aaKnown RBP17.96■□□□□ 0.47
TPM1-226ENST00000560959 IGFL2Q6UWQ7 119 aa17.96■□□□□ 0.47
TPM1-226ENST00000560959 ZNF398Q8TD17 642 aa17.96■□□□□ 0.47
TPM1-226ENST00000560959 UNKQ9C0B0 810 aaKnown RBP17.96■□□□□ 0.47
TPM1-226ENST00000560959 GPN3Q9UHW5 284 aaPredicted RBP17.96■□□□□ 0.47
TPM1-226ENST00000560959 PTRH2Q9Y3E5 179 aaKnown RBP17.96■□□□□ 0.47
TPM1-226ENST00000560959 POLQO75417 2590 aa17.95■□□□□ 0.46
TPM1-226ENST00000560959 C2CD3Q4AC94 2353 aa17.95■□□□□ 0.46
TPM1-226ENST00000560959 A0A087X0T9 212 aa17.95■□□□□ 0.46
TPM1-226ENST00000560959 C17orf113A0A1B0GUU1 675 aa17.95■□□□□ 0.46
TPM1-226ENST00000560959 GSAPA4D1B5 854 aa17.95■□□□□ 0.46
TPM1-226ENST00000560959 H3BMH7 237 aa17.95■□□□□ 0.46
TPM1-226ENST00000560959 APOL1O14791 398 aa17.95■□□□□ 0.46
TPM1-226ENST00000560959 DDX3YO15523 660 aaKnown RBP17.95■□□□□ 0.46
TPM1-226ENST00000560959 SERPING1P05155 500 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms