RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 LIN28AQ9H9Z2 209 aaKnown RBP8.44□□□□□ -1.06
CCDC33-209ENST00000560565 ARNT2Q9HBZ2 717 aa8.44□□□□□ -1.06
CCDC33-209ENST00000560565 TMEM165Q9HC07 324 aa8.44□□□□□ -1.06
CCDC33-209ENST00000560565 ABCC13Q9NSE7 274 aa8.44□□□□□ -1.06
CCDC33-209ENST00000560565 PAK1IP1Q9NWT1 392 aaPredicted RBP8.44□□□□□ -1.06
CCDC33-209ENST00000560565 ABI2Q9NYB9 513 aaPredicted RBP8.44□□□□□ -1.06
CCDC33-209ENST00000560565 AFF4Q9UHB7 1163 aaKnown RBP8.44□□□□□ -1.06
CCDC33-209ENST00000560565 POLG2Q9UHN1 485 aa8.44□□□□□ -1.06
CCDC33-209ENST00000560565 RIMKLBQ9ULI2 386 aa8.44□□□□□ -1.06
CCDC33-209ENST00000560565 PCDHGB4Q9UN71 923 aa8.44□□□□□ -1.06
CCDC33-209ENST00000560565 SATB2Q9UPW6 733 aa8.44□□□□□ -1.06
CCDC33-209ENST00000560565 SCML2Q9UQR0 700 aa8.44□□□□□ -1.06
CCDC33-209ENST00000560565 VWA7Q9Y334 891 aa8.44□□□□□ -1.06
CCDC33-209ENST00000560565 PCDHGB5Q9Y5G0 923 aa8.44□□□□□ -1.06
CCDC33-209ENST00000560565 PCDHA9Q9Y5H5 950 aa8.44□□□□□ -1.06
CCDC33-209ENST00000560565 AP1M2Q9Y6Q5 423 aa8.44□□□□□ -1.06
CCDC33-209ENST00000560565 DOCK6Q96HP0 2047 aa8.44□□□□□ -1.06
CCDC33-209ENST00000560565 MIA3Q5JRA6 1907 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 C2orf16Q68DN1 1984 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 MTMR11A4FU01 709 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 FAM172BPA6NC97 362 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 LOC730098B7Z3J9 87 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 NME4O00746 187 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 GNGT2O14610 69 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 STX16O14662 325 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 RGS13O14921 159 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 MATN3O15232 486 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 ACOX3O15254 700 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 GFRA3O60609 400 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 SNX2O60749 519 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 SLC22A3O75751 556 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 SOAT2O75908 522 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 RECQL5O94762 991 aaPredicted RBP8.43□□□□□ -1.06
CCDC33-209ENST00000560565 SCELO95171 688 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 MAP3K6O95382 1288 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 KRT8P05787 483 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 ANXA6P08133 673 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 SBK3P0C264 359 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 USP17L7P0C7H9 530 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 PABPC1P11940 636 aaKnown RBP8.43□□□□□ -1.06
CCDC33-209ENST00000560565 ZNF182P17025 639 aaPredicted RBP8.43□□□□□ -1.06
CCDC33-209ENST00000560565 SLC6A2P23975 617 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 CRHBPP24387 322 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 OR1D2P34982 312 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 MSX2P35548 267 aaPredicted RBP8.43□□□□□ -1.06
CCDC33-209ENST00000560565 CCR3P51677 355 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 PPP5CP53041 499 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 ATXN3P54252 364 aaPredicted RBP8.43□□□□□ -1.06
CCDC33-209ENST00000560565 ECT2LQ008S8 904 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 ZNF45Q02386 682 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 EMX2Q04743 252 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 LIPEQ05469 1076 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 SEMA3BQ13214 749 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 PRKG2Q13237 762 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 RCAN2Q14206 197 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 CSHL1Q14406 222 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 DLG2Q15700 870 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 C6orf141Q5SZD1 244 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 KANK2Q63ZY3 851 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 LILRA6Q6PI73 481 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 CNSTQ6PJW8 725 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 CES3Q6UWW8 571 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 ATG14Q6ZNE5 492 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 RTL10Q7L3V2 364 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 GPR149Q86SP6 731 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 SLCO6A1Q86UG4 719 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 MON1AQ86VX9 555 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 RNF135Q8IUD6 432 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 ARMC8Q8IUR7 673 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 EPHX4Q8IUS5 362 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 ZC3H7AQ8IWR0 971 aaKnown RBP8.43□□□□□ -1.06
CCDC33-209ENST00000560565 SPARTQ8N0X7 666 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 DPP10Q8N608 796 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 AMER2Q8N7J2 671 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 GLB1L3Q8NCI6 653 aaPredicted RBP8.43□□□□□ -1.06
CCDC33-209ENST00000560565 GALNT6Q8NCL4 622 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 KREMEN2Q8NCW0 462 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 FAM156AQ8NDB6 213 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 ITFG1Q8TB96 612 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 STAG3L4Q8TBR4 150 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 TWIST2Q8WVJ9 160 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 OVCA2Q8WZ82 227 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 TBC1D20Q96BZ9 403 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 TUBGCP3Q96CW5 907 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 CDK5RAP1Q96SZ6 601 aaKnown RBP8.43□□□□□ -1.06
CCDC33-209ENST00000560565 HEPHQ9BQS7 1158 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 BRINP2Q9C0B6 783 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 MMP27Q9H306 513 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 MFSD1Q9H3U5 465 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 GORASP2Q9H8Y8 452 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 NANOGQ9H9S0 305 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 GLOD4Q9HC38 313 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 AKIP1Q9NQ31 210 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 INIPQ9NRY2 104 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 TREX1Q9NSU2 369 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 OLA1Q9NTK5 396 aaKnown RBP8.43□□□□□ -1.06
CCDC33-209ENST00000560565 TMEM30AQ9NV96 361 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 THG1LQ9NWX6 298 aaKnown RBP8.43□□□□□ -1.06
CCDC33-209ENST00000560565 SLC17A6Q9P2U8 582 aa8.43□□□□□ -1.06
CCDC33-209ENST00000560565 DKK3Q9UBP4 350 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms