RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 CAPRIN2Q6IMN6 1127 aaKnown RBP13.69□□□□□ -0.22
PKNOX1-209ENST00000560448 RBM44Q6ZP01 1051 aaKnown RBP13.69□□□□□ -0.22
PKNOX1-209ENST00000560448 TRMT10CQ7L0Y3 403 aaKnown RBP13.69□□□□□ -0.22
PKNOX1-209ENST00000560448 RELL1Q8IUW5 271 aa13.69□□□□□ -0.22
PKNOX1-209ENST00000560448 PNPLA1Q8N8W4 532 aa13.69□□□□□ -0.22
PKNOX1-209ENST00000560448 OR2W6PQ8NHA6 318 aa13.69□□□□□ -0.22
PKNOX1-209ENST00000560448 PYROXD1Q8WU10 500 aa13.69□□□□□ -0.22
PKNOX1-209ENST00000560448 ELMO1Q92556 727 aa13.69□□□□□ -0.22
PKNOX1-209ENST00000560448 TMEM159Q96B96 161 aa13.69□□□□□ -0.22
PKNOX1-209ENST00000560448 GFM1Q96RP9 751 aaKnown RBP13.69□□□□□ -0.22
PKNOX1-209ENST00000560448 CCDC68Q9H2F9 335 aa13.69□□□□□ -0.22
PKNOX1-209ENST00000560448 LRRN3Q9H3W5 708 aa13.69□□□□□ -0.22
PKNOX1-209ENST00000560448 PIKFYVEQ9Y2I7 2098 aa13.69□□□□□ -0.22
PKNOX1-209ENST00000560448 UBA6A0AVT1 1052 aaPredicted RBP13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 PPM1DO15297 605 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 RIPK2O43353 540 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 DUX1O43812 170 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 OR1I1O60431 355 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 CPNE6O95741 557 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 MTHFD1P11586 935 aaKnown RBP13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 JUPP14923 745 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 PBLDP30039 288 aaPredicted RBP13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 MAPK9P45984 424 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 LEPRP48357 1165 aaKnown RBP13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 GYS2P54840 703 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 EIF3IQ13347 325 aaKnown RBP13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 TERF2Q15554 542 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 CEP85LQ5SZL2 805 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 UBAP2Q5T6F2 1119 aaKnown RBP13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 HES3Q5TGS1 186 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 KLHL35Q6PF15 583 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 UNC5AQ6ZN44 842 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 TMEM26Q6ZUK4 368 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 ZBED8Q8IZ13 594 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 CHCHD4Q8N4Q1 142 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 C2CD4AQ8NCU7 369 aaPredicted RBP13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 FBXO36Q8NEA4 188 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 PATE1Q8WXA2 126 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 KCNJ9Q92806 393 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 TMEM74Q96NL1 305 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 SLC40A1Q9NP59 571 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 LATS2Q9NRM7 1088 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 KCNK4Q9NYG8 393 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 ZNF624Q9P2J8 865 aaPredicted RBP13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 ADAM21Q9UKJ8 722 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 FBXO5Q9UKT4 447 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 CHMP2BQ9UQN3 213 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 MSRB2Q9Y3D2 182 aa13.68□□□□□ -0.22
PKNOX1-209ENST00000560448 SLC5A10A0PJK1 596 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 EML2O95834 649 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 S1PR4O95977 384 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 MT-CO3P00414 261 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 RPN2P04844 631 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 RPLP0P05388 317 aaKnown RBP13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 MYF5P13349 255 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 ATP5DP30049 168 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 SLC19A1P41440 591 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 EIF3BP55884 814 aaKnown RBP13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 TRA2AQ13595 282 aaKnown RBP eCLIP13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 CLCA4Q14CN2 919 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 SEPT7Q16181 437 aaKnown RBP13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 RPE65Q16518 533 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 CCDC157Q569K6 752 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 HSP90AA5PQ58FG0 334 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 PLEKHS1Q5SXH7 462 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 WDR74Q6RFH5 385 aaPredicted RBP13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 FAM83HQ6ZRV2 1179 aaPredicted RBP13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 OTOAQ7RTW8 1153 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 PDZD3Q86UT5 571 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 PIM3Q86V86 326 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 SLC26A11Q86WA9 606 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 PALM2Q8IXS6 379 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 CDKL2Q92772 493 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 AHCYL2Q96HN2 611 aaKnown RBP13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 PKNOX2Q96KN3 472 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 C12orf66Q96MD2 445 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 PWWP2AQ96N64 755 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 BIRC8Q96P09 236 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 TMEM109Q9BVC6 243 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 OR52A5Q9H2C5 316 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 CDC42EP4Q9H3Q1 356 aaKnown RBP13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 MVB12BQ9H7P6 319 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 LRRC4CQ9HCJ2 640 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 WDR37Q9Y2I8 494 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 PRSS21Q9Y6M0 314 aa13.67□□□□□ -0.22
PKNOX1-209ENST00000560448 IGHV1OR21-1A0A087WYE8 117 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 A0A1W2PQM1 296 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 D6RAR5 112 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 GOLGA8TH3BQL2 631 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 EIF3FO00303 357 aaPredicted RBP13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 HYAL3O43820 417 aaPredicted RBP13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 GPC4O75487 556 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 SLCO2B1O94956 709 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 SHBGP04278 402 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 PKMP14618 531 aaKnown RBP13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 CD9P21926 228 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 AOAHP28039 575 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 ALDH4A1P30038 563 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 CCKBRP32239 447 aa13.66□□□□□ -0.22
PKNOX1-209ENST00000560448 SLC1A2P43004 574 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms