RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 LRIG3Q6UXM1 1119 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 CEP128Q6ZU80 1094 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 ADGRG6Q86SQ4 1221 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 SLC26A11Q86WA9 606 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 TRIM69Q86WT6 500 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 LRRC6Q86X45 466 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 PHYKPLQ8IUZ5 450 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 C1orf210Q8IVY1 113 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 SRRM1Q8IYB3 904 aaKnown RBP5.14□□□□□ -1.59
SPG11-220ENST00000559933 SLC22A18ASQ8N1D0 253 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 PLD6Q8N2A8 252 aaKnown RBP5.14□□□□□ -1.59
SPG11-220ENST00000559933 RASGEF1AQ8N9B8 481 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 DDHD1Q8NEL9 900 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 GPR150Q8NGU9 434 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 ZNF398Q8TD17 642 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 ANKRD49Q8WVL7 239 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 CDKL2Q92772 493 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 GLYATL1Q969I3 302 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 CENPTQ96BT3 561 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 SGF29Q96ES7 293 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 PDXPQ96GD0 296 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 VPS39Q96JC1 886 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 BIRC8Q96P09 236 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 RUFY1Q96T51 708 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 DUSP23Q9BVJ7 150 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 TSPYL1Q9H0U9 437 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 OR2AG1Q9H205 316 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 P2RY12Q9H244 342 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 TCEAL2Q9H3H9 227 aaPredicted RBP5.14□□□□□ -1.59
SPG11-220ENST00000559933 SMOC1Q9H4F8 434 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 WDR26Q9H7D7 661 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 SGK2Q9HBY8 427 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 TMBIM4Q9HC24 238 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 MLXIPLQ9NP71 852 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 SARS2Q9NP81 518 aaKnown RBP5.14□□□□□ -1.59
SPG11-220ENST00000559933 ATXN10Q9UBB4 475 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 EIF2B4Q9UI10 523 aaKnown RBP5.14□□□□□ -1.59
SPG11-220ENST00000559933 RIMKLBQ9ULI2 386 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 SCML1Q9UN30 329 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 RUVBL2Q9Y230 463 aaKnown RBP5.14□□□□□ -1.59
SPG11-220ENST00000559933 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.14□□□□□ -1.59
SPG11-220ENST00000559933 LRP4O75096 1905 aa5.14□□□□□ -1.59
SPG11-220ENST00000559933 TP53BP1Q12888 1972 aaPredicted RBP5.14□□□□□ -1.59
SPG11-220ENST00000559933 TNRC6BQ9UPQ9 1833 aaKnown RBP5.13□□□□□ -1.59
SPG11-220ENST00000559933 CEP192Q8TEP8 1941 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 IGLV3-16A0A075B6K0 115 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 H3BMM5 538 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 RGS16O15492 202 aaPredicted RBP5.13□□□□□ -1.59
SPG11-220ENST00000559933 NDUFS2O75306 463 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 ZNF217O75362 1048 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 RFPL1O75677 317 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 RHOBTB1O94844 696 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 SLC25A14O95258 325 aaPredicted RBP5.13□□□□□ -1.59
SPG11-220ENST00000559933 TRIM16O95361 564 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 IVLP07476 585 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 KRT15P19012 456 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 MSH3P20585 1137 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 HNRNPA2B1P22626 353 aaKnown RBP5.13□□□□□ -1.59
SPG11-220ENST00000559933 NFKBIAP25963 317 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 HPDP32754 393 aaPredicted RBP5.13□□□□□ -1.59
SPG11-220ENST00000559933 LEPRP48357 1165 aaKnown RBP5.13□□□□□ -1.59
SPG11-220ENST00000559933 DHPSP49366 369 aaPredicted RBP5.13□□□□□ -1.59
SPG11-220ENST00000559933 SUOXP51687 545 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 CLCN5P51795 746 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 GYS2P54840 703 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 MAGOHP61326 146 aaKnown RBP5.13□□□□□ -1.59
SPG11-220ENST00000559933 CREB5Q02930 508 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 LAMB3Q13751 1172 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 ITGA9Q13797 1035 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 BOP1Q14137 746 aaKnown RBP5.13□□□□□ -1.59
SPG11-220ENST00000559933 USP10Q14694 798 aaKnown RBP5.13□□□□□ -1.59
SPG11-220ENST00000559933 ANGPT1Q15389 498 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 SPDYCQ5MJ68 293 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 PRAMEF14Q5SWL7 426 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 GRTP1Q5TC63 336 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 PTRHD1Q6GMV3 140 aaKnown RBP5.13□□□□□ -1.59
SPG11-220ENST00000559933 FAM83HQ6ZRV2 1179 aaPredicted RBP5.13□□□□□ -1.59
SPG11-220ENST00000559933 CDHR3Q6ZTQ4 885 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 TRABD2AQ86V40 505 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 EXOC3L1Q86VI1 746 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 WDR5BQ86VZ2 330 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 TRAPPC5Q8IUR0 188 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 VRK3Q8IV63 474 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 ZNF547Q8IVP9 402 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 SFTPA2Q8IWL1 248 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 CPNE9Q8IYJ1 553 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 NRSN1Q8IZ57 195 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 RBFAQ8N0V3 343 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 CAMKK1Q8N5S9 505 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 TMEM145Q8NBT3 493 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 CCL4L1Q8NHW4 92 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 CD200R1Q8TD46 325 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 MGARPQ8TDB4 240 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 KCTD4Q8WVF5 259 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 BTN2A2Q8WVV5 523 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 OR1E3Q8WZA6 343 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 PEX13Q92968 403 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.13□□□□□ -1.59
SPG11-220ENST00000559933 COX14Q96I36 57 aa5.13□□□□□ -1.59
SPG11-220ENST00000559933 HIC2Q96JB3 615 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms