RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 ANGPTL2Q9UKU9 493 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 PRSS21Q9Y6M0 314 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 ZDBF2Q9HCK1 2354 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 CHURC1-FNTBB4DL54 471 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 PI15O43692 258 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 TRIM16O95361 564 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 LHCGRP22888 699 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 CA5AP35218 305 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 RPS9P46781 194 aaKnown RBP17.48■□□□□ 0.39
SNX1-208ENST00000559844 ARHGEF7Q14155 803 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 PPP1R3AQ16821 1122 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 COPS8Q99627 209 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 MRPL1Q9BYD6 325 aaKnown RBP17.48■□□□□ 0.39
SNX1-208ENST00000559844 FAM126AQ9BYI3 521 aaPredicted RBP17.48■□□□□ 0.39
SNX1-208ENST00000559844 UTP6Q9NYH9 597 aaKnown RBP17.48■□□□□ 0.39
SNX1-208ENST00000559844 B4GALT6Q9UBX8 382 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 A0A1W2PQF6 199 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 TNFRSF10AO00220 468 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 PPP6CO00743 305 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 PIP5K1BO14986 540 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 ATG13O75143 517 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 C1SP09871 688 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 CBSLP0DN79 551 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 UROSP10746 265 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 COL9A1P20849 921 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 VIPR1P32241 457 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 CBSP35520 551 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 PKNOX1P55347 436 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 CAMK2GQ13555 558 aaPredicted RBP17.48■□□□□ 0.39
SNX1-208ENST00000559844 PTK2BQ14289 1009 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 ELAVL3Q14576 367 aaKnown RBP17.48■□□□□ 0.39
SNX1-208ENST00000559844 PCBP2Q15366 365 aaKnown RBP eCLIP17.48■□□□□ 0.391e-12■□□□□ 8.4
SNX1-208ENST00000559844 RBBP7Q16576 425 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 GPRC6AQ5T6X5 926 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 CYHR1Q6ZMK1 362 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 BNC2Q6ZN30 1099 aaPredicted RBP17.48■□□□□ 0.39
SNX1-208ENST00000559844 DDIASQ8IXT1 998 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 LRIG1Q96JA1 1093 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 COL25A1Q9BXS0 654 aaPredicted RBP17.48■□□□□ 0.39
SNX1-208ENST00000559844 AKTIPQ9H8T0 292 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 RAD18Q9NS91 495 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 OARD1Q9Y530 152 aa17.48■□□□□ 0.39
SNX1-208ENST00000559844 TSPAN11A1L157 253 aa17.47■□□□□ 0.39
SNX1-208ENST00000559844 E2F3O00716 465 aa17.47■□□□□ 0.39
SNX1-208ENST00000559844 PDE5AO76074 875 aa17.47■□□□□ 0.39
SNX1-208ENST00000559844 ITGB6P18564 788 aa17.47■□□□□ 0.39
SNX1-208ENST00000559844 PTDSS1P48651 473 aaKnown RBP17.47■□□□□ 0.39
SNX1-208ENST00000559844 SPINT3P49223 89 aa17.47■□□□□ 0.39
SNX1-208ENST00000559844 ACADVLP49748 655 aa17.47■□□□□ 0.39
SNX1-208ENST00000559844 AGTR2P50052 363 aa17.47■□□□□ 0.39
SNX1-208ENST00000559844 FOXA1P55317 472 aa17.47■□□□□ 0.39
SNX1-208ENST00000559844 SBSNQ6UWP8 590 aa17.47■□□□□ 0.39
SNX1-208ENST00000559844 TMEM92Q6UXU6 159 aa17.47■□□□□ 0.39
SNX1-208ENST00000559844 SYT13Q7L8C5 426 aa17.47■□□□□ 0.39
SNX1-208ENST00000559844 CLDN19Q8N6F1 224 aa17.47■□□□□ 0.39
SNX1-208ENST00000559844 PDPRQ8NCN5 879 aa17.47■□□□□ 0.39
SNX1-208ENST00000559844 LKAAEAR1Q8TD35 194 aa17.47■□□□□ 0.39
SNX1-208ENST00000559844 HCAR2Q8TDS4 363 aa17.47■□□□□ 0.39
SNX1-208ENST00000559844 OR8D1Q8WZ84 308 aa17.47■□□□□ 0.39
SNX1-208ENST00000559844 C3orf30Q96M34 536 aa17.47■□□□□ 0.39
SNX1-208ENST00000559844 ZNF382Q96SR6 550 aa17.47■□□□□ 0.39
SNX1-208ENST00000559844 CCT7Q99832 543 aa17.47■□□□□ 0.39
SNX1-208ENST00000559844 EPHX3Q9H6B9 360 aa17.47■□□□□ 0.39
SNX1-208ENST00000559844 C2orf42Q9NWW7 574 aa17.47■□□□□ 0.39
SNX1-208ENST00000559844 KCTD5Q9NXV2 234 aa17.47■□□□□ 0.39
SNX1-208ENST00000559844 WASF2Q9Y6W5 498 aa17.47■□□□□ 0.39
SNX1-208ENST00000559844 BPTFQ12830 3046 aa17.47■□□□□ 0.39
SNX1-208ENST00000559844 LBPP18428 481 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 MTAPQ13126 283 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 AGKQ53H12 422 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 GK5Q6ZS86 529 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 GPRIN3Q6ZVF9 776 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 SYVN1Q86TM6 617 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 SPEM1Q8N4L4 309 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 CHCHD4Q8N4Q1 142 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 CCDC97Q96F63 343 aaPredicted RBP17.46■□□□□ 0.39
SNX1-208ENST00000559844 TACO1Q9BSH4 297 aaKnown RBP17.46■□□□□ 0.39
SNX1-208ENST00000559844 SLC25A23Q9BV35 468 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 WDR41Q9HAD4 459 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 IL36AQ9UHA7 158 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 EIF2B4Q9UI10 523 aaKnown RBP17.46■□□□□ 0.39
SNX1-208ENST00000559844 POMPQ9Y244 141 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 IGLV3-16A0A075B6K0 115 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 ATP6AP2A0A1C7CYW4 349 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 EIF3FO00303 357 aaPredicted RBP17.46■□□□□ 0.39
SNX1-208ENST00000559844 FFAR2O15552 330 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 ATP6AP2O75787 350 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 SNRPB2P08579 225 aaKnown RBP17.46■□□□□ 0.39
SNX1-208ENST00000559844 OR56A5P0C7T3 313 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 VHLP40337 213 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 SEMG2Q02383 582 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 ATP13A5Q4VNC0 1218 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 CACUL1Q86Y37 369 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 DTX3LQ8TDB6 740 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 KCNA7Q96RP8 456 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 DLGAP2Q9P1A6 1054 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 BCAP29Q9UHQ4 241 aa17.46■□□□□ 0.39
SNX1-208ENST00000559844 CTSLP07711 333 aa17.45■□□□□ 0.38
SNX1-208ENST00000559844 ENO3P13929 434 aaPredicted RBP17.45■□□□□ 0.38
SNX1-208ENST00000559844 CD1EP15812 388 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms