RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 WDR48Q8TAF3 677 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 C9orf72Q96LT7 481 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 PANX3Q96QZ0 392 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 TSSK1BQ9BXA7 367 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 TBC1D10AQ9BXI6 508 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 STN1Q9H668 368 aaKnown RBP19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 SYNDIG1Q9H7V2 258 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 UCK1Q9HA47 277 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 PPANQ9NQ55 473 aaKnown RBP19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 POT1Q9NUX5 634 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 IMP3Q9NV31 184 aaKnown RBP19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 KCNK4Q9NYG8 393 aa19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 ATXN7L1Q9ULK2 861 aaPredicted RBP19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 COL27A1Q8IZC6 1860 aaPredicted RBP19.82■□□□□ 0.76
TSPAN3-207ENST00000559494 H3BMM5 538 aa19.81■□□□□ 0.76
TSPAN3-207ENST00000559494 RHOXF2BP0C7M4 288 aa19.81■□□□□ 0.76
TSPAN3-207ENST00000559494 ACADLP28330 430 aa19.81■□□□□ 0.76
TSPAN3-207ENST00000559494 ECHS1P30084 290 aa19.81■□□□□ 0.76
TSPAN3-207ENST00000559494 PLOD1Q02809 727 aaPredicted RBP19.81■□□□□ 0.76
TSPAN3-207ENST00000559494 CFHR1Q03591 330 aa19.81■□□□□ 0.76
TSPAN3-207ENST00000559494 MGAT5Q09328 741 aa19.81■□□□□ 0.76
TSPAN3-207ENST00000559494 HSPA14Q0VDF9 509 aa19.81■□□□□ 0.76
TSPAN3-207ENST00000559494 TARDBPQ13148 414 aaKnown RBP eCLIP19.81■□□□□ 0.764e-14■■□□□ 14.4
TSPAN3-207ENST00000559494 SPIDRQ14159 915 aa19.81■□□□□ 0.76
TSPAN3-207ENST00000559494 C3orf62Q6ZUJ4 267 aa19.81■□□□□ 0.76
TSPAN3-207ENST00000559494 TMPRSS9Q7Z410 1059 aa19.81■□□□□ 0.76
TSPAN3-207ENST00000559494 DCBLD1Q8N8Z6 715 aa19.81■□□□□ 0.76
TSPAN3-207ENST00000559494 PHC3Q8NDX5 983 aa19.81■□□□□ 0.76
TSPAN3-207ENST00000559494 ASZ1Q8WWH4 475 aa19.81■□□□□ 0.76
TSPAN3-207ENST00000559494 GFM1Q96RP9 751 aaKnown RBP19.81■□□□□ 0.76
TSPAN3-207ENST00000559494 RHOXF2Q9BQY4 288 aa19.81■□□□□ 0.76
TSPAN3-207ENST00000559494 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.81■□□□□ 0.76
TSPAN3-207ENST00000559494 FAM129AQ9BZQ8 928 aa19.81■□□□□ 0.76
TSPAN3-207ENST00000559494 LATS2Q9NRM7 1088 aa19.81■□□□□ 0.76
TSPAN3-207ENST00000559494 CLCA2Q9UQC9 943 aa19.81■□□□□ 0.76
TSPAN3-207ENST00000559494 KIF26BQ2KJY2 2108 aa19.81■□□□□ 0.76
TSPAN3-207ENST00000559494 TCEA3O75764 348 aa19.8■□□□□ 0.76
TSPAN3-207ENST00000559494 SLCO2B1O94956 709 aa19.8■□□□□ 0.76
TSPAN3-207ENST00000559494 CHRM3P20309 590 aa19.8■□□□□ 0.76
TSPAN3-207ENST00000559494 SHC2P98077 582 aa19.8■□□□□ 0.76
TSPAN3-207ENST00000559494 SQSTM1Q13501 440 aa19.8■□□□□ 0.76
TSPAN3-207ENST00000559494 GPR18Q14330 331 aa19.8■□□□□ 0.76
TSPAN3-207ENST00000559494 KIAA0408Q6ZU52 694 aa19.8■□□□□ 0.76
TSPAN3-207ENST00000559494 PDZD3Q86UT5 571 aa19.8■□□□□ 0.76
TSPAN3-207ENST00000559494 SPNS2Q8IVW8 549 aa19.8■□□□□ 0.76
TSPAN3-207ENST00000559494 RBM12BQ8IXT5 1001 aaKnown RBP19.8■□□□□ 0.76
TSPAN3-207ENST00000559494 GABPB2Q8TAK5 448 aaPredicted RBP19.8■□□□□ 0.76
TSPAN3-207ENST00000559494 TFGQ92734 400 aaPredicted RBP19.8■□□□□ 0.76
TSPAN3-207ENST00000559494 TMEM159Q96B96 161 aa19.8■□□□□ 0.76
TSPAN3-207ENST00000559494 FAM136AQ96C01 138 aa19.8■□□□□ 0.76
TSPAN3-207ENST00000559494 LRRC4CQ9HCJ2 640 aa19.8■□□□□ 0.76
TSPAN3-207ENST00000559494 SMYD2Q9NRG4 433 aa19.8■□□□□ 0.76
TSPAN3-207ENST00000559494 MED16Q9Y2X0 877 aa19.8■□□□□ 0.76
TSPAN3-207ENST00000559494 CEP295Q9C0D2 2601 aa19.8■□□□□ 0.76
TSPAN3-207ENST00000559494 LILRA5A6NI73 299 aa19.79■□□□□ 0.76
TSPAN3-207ENST00000559494 IFRD1O00458 451 aaPredicted RBP19.79■□□□□ 0.76
TSPAN3-207ENST00000559494 ZW10O43264 779 aa19.79■□□□□ 0.76
TSPAN3-207ENST00000559494 APOA4P06727 396 aa19.79■□□□□ 0.76
TSPAN3-207ENST00000559494 GSTA2P09210 222 aa19.79■□□□□ 0.76
TSPAN3-207ENST00000559494 ABCG1P45844 678 aa19.79■□□□□ 0.76
TSPAN3-207ENST00000559494 SYTL3Q4VX76 610 aa19.79■□□□□ 0.76
TSPAN3-207ENST00000559494 CCNI2Q6ZMN8 369 aaPredicted RBP19.79■□□□□ 0.76
TSPAN3-207ENST00000559494 ZNF574Q6ZN55 896 aaPredicted RBP19.79■□□□□ 0.76
TSPAN3-207ENST00000559494 RBM44Q6ZP01 1051 aaKnown RBP19.79■□□□□ 0.76
TSPAN3-207ENST00000559494 CYS1Q717R9 158 aa19.79■□□□□ 0.76
TSPAN3-207ENST00000559494 GALNT7Q86SF2 657 aa19.79■□□□□ 0.76
TSPAN3-207ENST00000559494 SLC22A15Q8IZD6 547 aa19.79■□□□□ 0.76
TSPAN3-207ENST00000559494 FERD3LQ96RJ6 166 aa19.79■□□□□ 0.76
TSPAN3-207ENST00000559494 AARSD1Q9BTE6 412 aaKnown RBP19.79■□□□□ 0.76
TSPAN3-207ENST00000559494 RDH14Q9HBH5 336 aa19.79■□□□□ 0.76
TSPAN3-207ENST00000559494 PSAT1Q9Y617 370 aa19.79■□□□□ 0.76
TSPAN3-207ENST00000559494 AKAP13Q12802 2813 aa19.79■□□□□ 0.76
TSPAN3-207ENST00000559494 D6RAR5 112 aa19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 KPNA5O15131 536 aa19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 CSO75390 466 aaKnown RBP19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 PIAS1O75925 651 aa19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 HOXB3P14651 431 aaPredicted RBP19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 PDX1P52945 283 aa19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 EPHA4P54764 986 aa19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 GPLD1P80108 840 aa19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 TIAL1Q01085 375 aaKnown RBP eCLIP19.78■□□□□ 0.769e-7■□□□□ 9.8
TSPAN3-207ENST00000559494 ISXQ2M1V0 245 aa19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 PLEKHS1Q5SXH7 462 aa19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 OTOAQ7RTW8 1153 aa19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 B3GNT8Q7Z7M8 397 aa19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 IFT20Q8IY31 132 aa19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 OR10G6Q8NH81 332 aa19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 ZFPM2Q8WW38 1151 aa19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 JPH3Q8WXH2 748 aaPredicted RBP19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 SLC30A3Q99726 388 aa19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 NUDT22Q9BRQ3 303 aa19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 CCDC68Q9H2F9 335 aa19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 OGFRQ9NZT2 677 aa19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 MTRF1LQ9UGC7 380 aaKnown RBP19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 NEUROG3Q9Y4Z2 214 aa19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 HEBP2Q9Y5Z4 205 aa19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 COMMD10Q9Y6G5 202 aa19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 COLEC10Q9Y6Z7 277 aa19.78■□□□□ 0.76
TSPAN3-207ENST00000559494 TCRBV9S1A1TA0A576 114 aa19.77■□□□□ 0.76
TSPAN3-207ENST00000559494 CXorf49A8MYA2 514 aaPredicted RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms