RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 MCM3P25205 808 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 ATP5DP30049 168 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 SLC19A1P41440 591 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 HSPA14Q0VDF9 509 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 RPE65Q16518 533 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 PLEKHS1Q5SXH7 462 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.2■□□□□ 0.98
SNX1-206ENST00000559389 FAM45BPQ6NSW5 357 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 EFL1Q7Z2Z2 1120 aaKnown RBP21.2■□□□□ 0.98
SNX1-206ENST00000559389 SLC9B2Q86UD5 537 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 VRK3Q8IV63 474 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 ZBTB2Q8N680 514 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 GPATCH11Q8N954 259 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 OR6C4Q8NGE1 309 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 FAM45AQ8TCE6 357 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 CD200R1Q8TD46 325 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 CCDC74AQ96AQ1 378 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 VPS39Q96JC1 886 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 C12orf66Q96MD2 445 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 PARD6BQ9BYG5 372 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 EPB41L4BQ9H329 900 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 IMP3Q9NV31 184 aaKnown RBP21.2■□□□□ 0.98
SNX1-206ENST00000559389 GALPQ9UBC7 116 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 CPNE7Q9UBL6 633 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 RAB21Q9UL25 225 aa21.2■□□□□ 0.98
SNX1-206ENST00000559389 TRBV23OR9-2A0A075B6M9 112 aa21.19■□□□□ 0.98
SNX1-206ENST00000559389 A0A087WUV0 522 aaPredicted RBP21.19■□□□□ 0.98
SNX1-206ENST00000559389 FAM95CA0A1B0GW59 222 aa21.19■□□□□ 0.98
SNX1-206ENST00000559389 DCDC2BA2VCK2 349 aa21.19■□□□□ 0.98
SNX1-206ENST00000559389 CPED1A4D0V7 1026 aa21.19■□□□□ 0.98
SNX1-206ENST00000559389 CD9P21926 228 aa21.19■□□□□ 0.98
SNX1-206ENST00000559389 LIMK2P53671 638 aa21.19■□□□□ 0.98
SNX1-206ENST00000559389 CDKN2DP55273 166 aa21.19■□□□□ 0.98
SNX1-206ENST00000559389 TIAL1Q01085 375 aaKnown RBP eCLIP21.19■□□□□ 0.98
SNX1-206ENST00000559389 HHEXQ03014 270 aa21.19■□□□□ 0.98
SNX1-206ENST00000559389 PUM1Q14671 1186 aaKnown RBP eCLIP21.19■□□□□ 0.98
SNX1-206ENST00000559389 NAA30Q147X3 362 aaPredicted RBP21.19■□□□□ 0.98
SNX1-206ENST00000559389 NR1D2Q14995 579 aa21.19■□□□□ 0.98
SNX1-206ENST00000559389 PERM1Q5SV97 790 aa21.19■□□□□ 0.98
SNX1-206ENST00000559389 HECTD2Q5U5R9 776 aa21.19■□□□□ 0.98
SNX1-206ENST00000559389 DUS1LQ6P1R4 473 aaKnown RBP21.19■□□□□ 0.98
SNX1-206ENST00000559389 SIDT2Q8NBJ9 832 aaKnown RBP21.19■□□□□ 0.98
SNX1-206ENST00000559389 IFI44Q8TCB0 444 aa21.19■□□□□ 0.98
SNX1-206ENST00000559389 AENQ8WTP8 325 aaKnown RBP21.19■□□□□ 0.98
SNX1-206ENST00000559389 CXorf40BQ96DE9 158 aa21.19■□□□□ 0.98
SNX1-206ENST00000559389 INSM2Q96T92 566 aaPredicted RBP21.19■□□□□ 0.98
SNX1-206ENST00000559389 GPR21Q99679 349 aa21.19■□□□□ 0.98
SNX1-206ENST00000559389 SLC30A3Q99726 388 aa21.19■□□□□ 0.98
SNX1-206ENST00000559389 STN1Q9H668 368 aaKnown RBP21.19■□□□□ 0.98
SNX1-206ENST00000559389 LRIT1Q9P2V4 623 aa21.19■□□□□ 0.98
SNX1-206ENST00000559389 PCDHGA1Q9Y5H4 931 aa21.19■□□□□ 0.98
SNX1-206ENST00000559389 CEP250Q9BV73 2442 aa21.19■□□□□ 0.98
SNX1-206ENST00000559389 IFRD1O00458 451 aaPredicted RBP21.18■□□□□ 0.98
SNX1-206ENST00000559389 GP1BAP07359 652 aa21.18■□□□□ 0.98
SNX1-206ENST00000559389 PNLIPP16233 465 aa21.18■□□□□ 0.98
SNX1-206ENST00000559389 FDXRP22570 491 aa21.18■□□□□ 0.98
SNX1-206ENST00000559389 ACADLP28330 430 aa21.18■□□□□ 0.98
SNX1-206ENST00000559389 SIM1P81133 766 aaPredicted RBP21.18■□□□□ 0.98
SNX1-206ENST00000559389 ILKQ13418 452 aa21.18■□□□□ 0.98
SNX1-206ENST00000559389 KLHL38Q2WGJ6 581 aa21.18■□□□□ 0.98
SNX1-206ENST00000559389 TTLL9Q3SXZ7 439 aa21.18■□□□□ 0.98
SNX1-206ENST00000559389 PIM3Q86V86 326 aa21.18■□□□□ 0.98
SNX1-206ENST00000559389 TRIM48Q8IWZ4 208 aa21.18■□□□□ 0.98
SNX1-206ENST00000559389 ACVR1CQ8NER5 493 aa21.18■□□□□ 0.98
SNX1-206ENST00000559389 OLFM1Q99784 485 aa21.18■□□□□ 0.98
SNX1-206ENST00000559389 TAS2R13Q9NYV9 303 aa21.18■□□□□ 0.98
SNX1-206ENST00000559389 DHRS7Q9Y394 339 aa21.18■□□□□ 0.98
SNX1-206ENST00000559389 CFAP20Q9Y6A4 193 aaKnown RBP21.18■□□□□ 0.98
SNX1-206ENST00000559389 RHPN2P1A8MT19 583 aa21.17■□□□□ 0.98
SNX1-206ENST00000559389 PPM1DO15297 605 aa21.17■□□□□ 0.98
SNX1-206ENST00000559389 RFPL3O75679 317 aa21.17■□□□□ 0.98
SNX1-206ENST00000559389 DKK1O94907 266 aa21.17■□□□□ 0.98
SNX1-206ENST00000559389 VIPP01282 170 aa21.17■□□□□ 0.98
SNX1-206ENST00000559389 TUBBP07437 444 aa21.17■□□□□ 0.98
SNX1-206ENST00000559389 BIRC2Q13490 618 aa21.17■□□□□ 0.98
SNX1-206ENST00000559389 GRTP1Q5TC63 336 aa21.17■□□□□ 0.98
SNX1-206ENST00000559389 UGT3A1Q6NUS8 523 aa21.17■□□□□ 0.98
SNX1-206ENST00000559389 EMBQ6PCB8 327 aa21.17■□□□□ 0.98
SNX1-206ENST00000559389 SPNS2Q8IVW8 549 aa21.17■□□□□ 0.98
SNX1-206ENST00000559389 UHMK1Q8TAS1 419 aaKnown RBP21.17■□□□□ 0.98
SNX1-206ENST00000559389 ELMO2Q96JJ3 720 aa21.17■□□□□ 0.98
SNX1-206ENST00000559389 GPR22Q99680 433 aa21.17■□□□□ 0.98
SNX1-206ENST00000559389 TRMT6Q9UJA5 497 aaKnown RBP21.17■□□□□ 0.98
SNX1-206ENST00000559389 HEBP2Q9Y5Z4 205 aa21.17■□□□□ 0.98
SNX1-206ENST00000559389 PRAMEF33A0A0G2JMD5 474 aa21.16■□□□□ 0.98
SNX1-206ENST00000559389 LILRA5A6NI73 299 aa21.16■□□□□ 0.98
SNX1-206ENST00000559389 FAM155BO75949 473 aa21.16■□□□□ 0.98
SNX1-206ENST00000559389 FTH1P19P0C7X4 201 aa21.16■□□□□ 0.98
SNX1-206ENST00000559389 ACSBG2Q5FVE4 666 aa21.16■□□□□ 0.98
SNX1-206ENST00000559389 RBM12BQ8IXT5 1001 aaKnown RBP21.16■□□□□ 0.98
SNX1-206ENST00000559389 CPNE9Q8IYJ1 553 aa21.16■□□□□ 0.98
SNX1-206ENST00000559389 TFGQ92734 400 aaPredicted RBP21.16■□□□□ 0.98
SNX1-206ENST00000559389 INPP5DQ92835 1189 aa21.16■□□□□ 0.98
SNX1-206ENST00000559389 CAVIN3Q969G5 261 aa21.16■□□□□ 0.98
SNX1-206ENST00000559389 SH3KBP1Q96B97 665 aa21.16■□□□□ 0.98
SNX1-206ENST00000559389 CCDC3Q9BQI4 270 aa21.16■□□□□ 0.98
SNX1-206ENST00000559389 UCK1Q9HA47 277 aa21.16■□□□□ 0.98
SNX1-206ENST00000559389 SLC40A1Q9NP59 571 aa21.16■□□□□ 0.98
SNX1-206ENST00000559389 VWA7Q9Y334 891 aa21.16■□□□□ 0.98
SNX1-206ENST00000559389 EIF3FO00303 357 aaPredicted RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms