RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 VPS39Q96JC1 886 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 RBBP8Q99708 897 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 RTKNQ9BST9 563 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 DUSP23Q9BVJ7 150 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 SARS2Q9NP81 518 aaKnown RBP10.65□□□□□ -0.7
TPM1-217ENST00000559108 OGFRQ9NZT2 677 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 ZFATQ9P243 1243 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 CIDEBQ9UHD4 219 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 PCDHB1Q9Y5F3 818 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 NFS1Q9Y697 457 aa10.65□□□□□ -0.7
TPM1-217ENST00000559108 UNC13CQ8NB66 2214 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 FAM95CA0A1B0GW59 222 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 TNFSF14O43557 240 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 SLCO2B1O94956 709 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 SHBGP04278 402 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 FTH1P19P0C7X4 201 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 ALPPL2P10696 532 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 MTHFD1P11586 935 aaKnown RBP10.64□□□□□ -0.71
TPM1-217ENST00000559108 CEACAM1P13688 526 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 XRCC1P18887 633 aaPredicted RBP10.64□□□□□ -0.71
TPM1-217ENST00000559108 FASLGP48023 281 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 PMS2P54278 862 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 OR1D5P58170 312 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 TAS2R39P59534 338 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 PPP1CAP62136 330 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 DAB2P98082 770 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 BMPR2Q13873 1038 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 GPR18Q14330 331 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 NR1D2Q14995 579 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 HECTD2Q5U5R9 776 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 ZNF449Q6P9G9 518 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 SPRED1Q7Z699 444 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 PDZD3Q86UT5 571 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 SLC26A11Q86WA9 606 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 CTAGE3PQ8IX95 158 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 OR5AR1Q8NGP9 310 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 IFI44Q8TCB0 444 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 SCG3Q8WXD2 468 aaKnown RBP10.64□□□□□ -0.71
TPM1-217ENST00000559108 UBXN4Q92575 508 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 KCNJ9Q92806 393 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 GLMNQ92990 594 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 CCDC3Q9BQI4 270 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 MENTQ9BUN1 341 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 TBC1D10AQ9BXI6 508 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 RHOJQ9H4E5 214 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 SLC40A1Q9NP59 571 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 LATS2Q9NRM7 1088 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 IMP3Q9NV31 184 aaKnown RBP10.64□□□□□ -0.71
TPM1-217ENST00000559108 TMEM9Q9P0T7 183 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 LRIT1Q9P2V4 623 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 CPNE7Q9UBL6 633 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 RAB21Q9UL25 225 aa10.64□□□□□ -0.71
TPM1-217ENST00000559108 ATXN7L1Q9ULK2 861 aaPredicted RBP10.64□□□□□ -0.71
TPM1-217ENST00000559108 CACNA1AO00555 2505 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 FOXO6A8MYZ6 492 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 LIN7AO14910 233 aaPredicted RBP10.63□□□□□ -0.71
TPM1-217ENST00000559108 PHGDHO43175 533 aaKnown RBP10.63□□□□□ -0.71
TPM1-217ENST00000559108 KCNJ13O60928 360 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 VCLP18206 1134 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 MCM3P25205 808 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 STX2P32856 288 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 BDKRB1P46663 353 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 LIMK2P53671 638 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 CCL7P80098 99 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 INSM1Q01101 510 aaPredicted RBP10.63□□□□□ -0.71
TPM1-217ENST00000559108 HHEXQ03014 270 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 SLC29A2Q14542 456 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 INAVAQ3KP66 663 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.63□□□□□ -0.71
TPM1-217ENST00000559108 PPM1JQ5JR12 505 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 NKAIN2Q5VXU1 208 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 PAQR3Q6TCH7 311 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 DHRS13Q6UX07 377 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 CYHR1Q6ZMK1 362 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 PIWIL4Q7Z3Z4 852 aaKnown RBP10.63□□□□□ -0.71
TPM1-217ENST00000559108 ZBTB2Q8N680 514 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 GPATCH11Q8N954 259 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 Q8N9G6 341 aaPredicted RBP10.63□□□□□ -0.71
TPM1-217ENST00000559108 MAPK15Q8TD08 544 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 DCAKDQ8WVC6 231 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 ANKRD49Q8WVL7 239 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 DLG3Q92796 817 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 C12orf66Q96MD2 445 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 TTC1Q99614 292 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 CDC6Q99741 560 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 DHRS4Q9BTZ2 278 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 CTNNAL1Q9UBT7 734 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 ADAMTS6Q9UKP5 1117 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 ACSL5Q9ULC5 683 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 PLAGL1Q9UM63 463 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 WASF3Q9UPY6 502 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 DHRS7Q9Y394 339 aa10.63□□□□□ -0.71
TPM1-217ENST00000559108 KIR2DS5A0A0G2JLQ3 304 aa10.62□□□□□ -0.71
TPM1-217ENST00000559108 A0A0G2JNG1 304 aa10.62□□□□□ -0.71
TPM1-217ENST00000559108 PMS2P1A4D2B8 440 aa10.62□□□□□ -0.71
TPM1-217ENST00000559108 H3BMM5 538 aa10.62□□□□□ -0.71
TPM1-217ENST00000559108 KIR2DS3K7RE56 304 aa10.62□□□□□ -0.71
TPM1-217ENST00000559108 QSOX1O00391 747 aa10.62□□□□□ -0.71
TPM1-217ENST00000559108 NUDT21O43809 227 aaKnown RBP10.62□□□□□ -0.71
TPM1-217ENST00000559108 SPAG6O75602 509 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms