RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 TUBB2AQ13885 445 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 SLMAPQ14BN4 828 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 RRS1Q15050 365 aaKnown RBP1.58□□□□□ -2.16
USP3-209ENST00000558925 TDRD12Q587J7 1177 aaKnown RBP1.58□□□□□ -2.16
USP3-209ENST00000558925 NHSL2Q5HYW2 709 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 GRTP1Q5TC63 336 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 PLA2G4FQ68DD2 849 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 ZNF549Q6P9A3 640 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 PET117Q6UWS5 81 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 GFRALQ6UXV0 394 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 CCNI2Q6ZMN8 369 aaPredicted RBP1.58□□□□□ -2.16
USP3-209ENST00000558925 TMPRSS11FQ6ZWK6 438 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 OTOAQ7RTW8 1153 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 SPATA19Q7Z5L4 167 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 ADCK2Q7Z695 626 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 MRPL10Q7Z7H8 261 aaKnown RBP1.58□□□□□ -2.16
USP3-209ENST00000558925 DSG4Q86SJ6 1040 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 SATL1Q86VE3 508 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 TMEM219Q86XT9 240 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 NUP93Q8N1F7 819 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 SIX6OS1Q8N1H7 587 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 CRYBG2Q8N1P7 616 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 ZNF843Q8N446 348 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 CARNMT1Q8N4J0 409 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 GBGT1Q8N5D6 347 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 ZNF441Q8N8Z8 693 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 ZNF114Q8NC26 417 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 OCC1Q8TAD7 63 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 OLIG1Q8TAK6 271 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 FIBINQ8TAL6 211 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 GDAP1Q8TB36 358 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 SETD6Q8TBK2 473 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 SMPDL3BQ92485 455 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 SYN2Q92777 582 aaPredicted RBP1.58□□□□□ -2.16
USP3-209ENST00000558925 TANKQ92844 425 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 ABTB1Q969K4 478 aaPredicted RBP1.58□□□□□ -2.16
USP3-209ENST00000558925 PIGTQ969N2 578 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 PHF21AQ96BD5 680 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 SPSB1Q96BD6 273 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 CCDC114Q96M63 670 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 MUS81Q96NY9 551 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 QRFPRQ96P65 431 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 NEK1Q96PY6 1258 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 RAB3IPQ96QF0 476 aaPredicted RBP1.58□□□□□ -2.16
USP3-209ENST00000558925 CPNE1Q99829 537 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 TUBB2BQ9BVA1 445 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 C2orf40Q9H1Z8 148 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 LRMDAQ9H2I8 198 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 MRPL44Q9H9J2 332 aaKnown RBP1.58□□□□□ -2.16
USP3-209ENST00000558925 HHATLQ9HCP6 504 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 TRPC7Q9HCX4 862 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 POT1Q9NUX5 634 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 MIOSQ9NXC5 875 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 RASAL2Q9UJF2 1139 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 PADI2Q9Y2J8 665 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 SPIN1Q9Y657 262 aaPredicted RBP1.58□□□□□ -2.16
USP3-209ENST00000558925 ATXN2Q99700 1313 aaKnown RBP1.58□□□□□ -2.16
USP3-209ENST00000558925 ZNF541Q9H0D2 1346 aa1.58□□□□□ -2.16
USP3-209ENST00000558925 A0A0G2JPF8 293 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 A0A1W2PPK0 400 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 A0A1W2PPQ1 181 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 HYKKA2RU49 373 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 FAM90A10PA6NDY2 464 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 ANXA2P2A6NMY6 339 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 HNRNPCL3B7ZW38 293 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 ZNF587BE7ETH6 402 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 CCDC188H7C350 402 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 DNM1LO00429 736 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 PTGESO14684 152 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 EIF3DO15371 548 aaKnown RBP eCLIP1.57□□□□□ -2.16
USP3-209ENST00000558925 IPO8O15397 1037 aaKnown RBP1.57□□□□□ -2.16
USP3-209ENST00000558925 INSIG1O15503 277 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 AP5Z1O43299 807 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 FMO6PO60774 539 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 NME6O75414 186 aaPredicted RBP1.57□□□□□ -2.16
USP3-209ENST00000558925 CAMTA2O94983 1202 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 GOSR1O95249 250 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 PMS2P2O95744 297 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 CRYABP02511 175 aaKnown RBP1.57□□□□□ -2.16
USP3-209ENST00000558925 ACAA1P09110 424 aaPredicted RBP1.57□□□□□ -2.16
USP3-209ENST00000558925 RAB40ALP0C0E4 278 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 TMEM191BP0C7N4 346 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 SMIM18P0DKX4 95 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 HNRNPCL4P0DMR1 293 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 TGFB3P10600 412 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 PLA2G2AP14555 144 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 ADRA2CP18825 462 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 JAK1P23458 1154 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 TNFRSF8P28908 595 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 HOXD3P31249 432 aaPredicted RBP1.57□□□□□ -2.16
USP3-209ENST00000558925 MTHFRP42898 656 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 AMPHP49418 695 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 MMP15P51511 669 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 CTSCP53634 463 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 MAPK12P53778 367 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 KRTAP10-12P60413 245 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 TUBB4BP68371 445 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 YWHAHQ04917 246 aaPredicted RBP1.57□□□□□ -2.16
USP3-209ENST00000558925 PTPRCAPQ14761 206 aa1.57□□□□□ -2.16
USP3-209ENST00000558925 UGP2Q16851 508 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms