RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 Q6ZVL8 140 aa11.02□□□□□ -0.65
RABGGTA-204ENST00000558376 MFSD3Q96ES6 412 aa11.02□□□□□ -0.65
RABGGTA-204ENST00000558376 DTD2Q96FN9 168 aa11.02□□□□□ -0.65
RABGGTA-204ENST00000558376 SCARF2Q96GP6 870 aaPredicted RBP11.02□□□□□ -0.65
RABGGTA-204ENST00000558376 CATSPER2Q96P56 530 aa11.02□□□□□ -0.65
RABGGTA-204ENST00000558376 SMIM14Q96QK8 99 aa11.02□□□□□ -0.65
RABGGTA-204ENST00000558376 CCDC77Q9BR77 488 aa11.02□□□□□ -0.65
RABGGTA-204ENST00000558376 TMEM109Q9BVC6 243 aa11.02□□□□□ -0.65
RABGGTA-204ENST00000558376 FSD1LQ9BXM9 530 aa11.02□□□□□ -0.65
RABGGTA-204ENST00000558376 ROPN1BQ9BZX4 212 aaPredicted RBP11.02□□□□□ -0.65
RABGGTA-204ENST00000558376 PHACTR1Q9C0D0 580 aa11.02□□□□□ -0.65
RABGGTA-204ENST00000558376 POLR1EQ9GZS1 481 aaKnown RBP11.02□□□□□ -0.65
RABGGTA-204ENST00000558376 ROPN1Q9HAT0 212 aaPredicted RBP11.02□□□□□ -0.65
RABGGTA-204ENST00000558376 KCNK4Q9NYG8 393 aa11.02□□□□□ -0.65
RABGGTA-204ENST00000558376 BFARQ9NZS9 450 aa11.02□□□□□ -0.65
RABGGTA-204ENST00000558376 PDP2Q9P2J9 529 aa11.02□□□□□ -0.65
RABGGTA-204ENST00000558376 ANAPC2Q9UJX6 822 aa11.02□□□□□ -0.65
RABGGTA-204ENST00000558376 A0A0U1RQS6 177 aa11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 ERI2A8K979 691 aaKnown RBP11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 A8MU76 341 aa11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 GOLGA8TH3BQL2 631 aa11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 ZW10O43264 779 aa11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 ZNF189O75820 626 aaPredicted RBP11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 GEMP55040 296 aa11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 AP1S1P61966 158 aa11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 CDH17Q12864 832 aa11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 DCAF12Q5T6F0 453 aa11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 TTC19Q6DKK2 380 aaPredicted RBP11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 DOK6Q6PKX4 331 aa11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 FAM129CQ86XR2 697 aa11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 KLHDC8BQ8IXV7 354 aa11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 NRSN1Q8IZ57 195 aa11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 C9orf43Q8TAL5 461 aaPredicted RBP11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 SPOCK2Q92563 424 aa11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 ZNF599Q96NL3 588 aa11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 PSMG3-AS1Q96PY0 264 aa11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 PSKH2Q96QS6 385 aa11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 CTRCQ99895 268 aa11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 ASPSCR1Q9BZE9 553 aa11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 ACSS3Q9H6R3 686 aa11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 PPANQ9NQ55 473 aaKnown RBP11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 TMEM98Q9Y2Y6 226 aa11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 RPS6KL1Q9Y6S9 549 aa11.01□□□□□ -0.65
RABGGTA-204ENST00000558376 PSMD3O43242 534 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 EML2O95834 649 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 PIRTP0C851 137 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 ERVK-10P10266 1014 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 NMBRP28336 390 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 TEAD1P28347 426 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 PHBP35232 272 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 ACTR1BP42025 376 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 ACTR1AP61163 376 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 MC2RQ01718 297 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 MPP3Q13368 585 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 RFTN1Q14699 578 aaPredicted RBP11□□□□□ -0.65
RABGGTA-204ENST00000558376 TMED2Q15363 201 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 DEFB109BQ30KR1 87 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 SNAP47Q5SQN1 464 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 ATP1A1-AS1Q5TC04 95 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 TECPR1Q7Z6L1 1165 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 TSPAN33Q86UF1 283 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 CTAGE3PQ8IX95 158 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 PPM1NQ8N819 430 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 LRRC39Q96DD0 335 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 PGM2Q96G03 612 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 ABHD17AQ96GS6 310 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 DPYSL5Q9BPU6 564 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 GPN2Q9H9Y4 310 aaPredicted RBP11□□□□□ -0.65
RABGGTA-204ENST00000558376 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11□□□□□ -0.65
RABGGTA-204ENST00000558376 A0A1W2PPM1 405 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 NPIPB15A6NHN6 443 aaPredicted RBP11□□□□□ -0.65
RABGGTA-204ENST00000558376 CAPN5O15484 640 aaPredicted RBP11□□□□□ -0.65
RABGGTA-204ENST00000558376 SOD1P00441 154 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 PDHA1P08559 390 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 NPY2RP49146 381 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 CDC20Q12834 499 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 TRAF2Q12933 501 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 MSLNQ13421 630 aaPredicted RBP11□□□□□ -0.65
RABGGTA-204ENST00000558376 GALNT3Q14435 633 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 PYCR3Q53H96 274 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 SIRPB2Q5JXA9 342 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 RAET1GQ6H3X3 334 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 ARHGAP22Q7Z5H3 698 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 LINC00523Q86TU6 105 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 EXOC3L1Q86VI1 746 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 NLGN4XQ8N0W4 816 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 NLGN4YQ8NFZ3 816 aaPredicted RBP11□□□□□ -0.65
RABGGTA-204ENST00000558376 GSDMBQ8TAX9 411 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 PDCD6IPQ8WUM4 868 aaKnown RBP11□□□□□ -0.65
RABGGTA-204ENST00000558376 TADA1Q96BN2 335 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 TLCD1Q96CP7 247 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 CYTH2Q99418 400 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 PAFAH2Q99487 392 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 MGME1Q9BQP7 344 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 APMAPQ9HDC9 416 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 EURLQ9NYK6 297 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 MOCS1Q9NZB8 636 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 SAMD15Q9P1V8 674 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 SLC2A6Q9UGQ3 507 aa11□□□□□ -0.65
RABGGTA-204ENST00000558376 ADAM21Q9UKJ8 722 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms