RNA–Protein interactions for RNA: ENST00000557975.5

ETFA-204, Transcript of electron transfer flavoprotein subunit alpha, human

TSL 3

Gene ETFA, Length 1,086 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ETFA-204	ENST00000557975	SLC15A1	P46059	708 aa		4.08	□□□□□ -1.76
ETFA-204	ENST00000557975	MELK	Q14680	651 aa		4.08	□□□□□ -1.76
ETFA-204	ENST00000557975	DLG2	Q15700	870 aa		4.08	□□□□□ -1.76
ETFA-204	ENST00000557975	FFAR4	Q5NUL3	377 aa		4.08	□□□□□ -1.76
ETFA-204	ENST00000557975	TMCO3	Q6UWJ1	677 aa		4.08	□□□□□ -1.76
ETFA-204	ENST00000557975	C1orf122	Q6ZSJ8	110 aa		4.08	□□□□□ -1.76
ETFA-204	ENST00000557975	HAUS6	Q7Z4H7	955 aa		4.08	□□□□□ -1.76
ETFA-204	ENST00000557975	CERS3	Q8IU89	383 aa		4.08	□□□□□ -1.76
ETFA-204	ENST00000557975	ZNF485	Q8NCK3	441 aa		4.08	□□□□□ -1.76
ETFA-204	ENST00000557975	LRRC59	Q96AG4	307 aa	Known RBP	4.08	□□□□□ -1.76
ETFA-204	ENST00000557975	ART5	Q96L15	291 aa		4.08	□□□□□ -1.76
ETFA-204	ENST00000557975	SGK494	Q96LW2	274 aa		4.08	□□□□□ -1.76
ETFA-204	ENST00000557975	CHCHD6	Q9BRQ6	235 aa		4.08	□□□□□ -1.76
ETFA-204	ENST00000557975	TRAF4	Q9BUZ4	470 aa	Predicted RBP	4.08	□□□□□ -1.76
ETFA-204	ENST00000557975	ABHD6	Q9BV23	337 aa		4.08	□□□□□ -1.76
ETFA-204	ENST00000557975	NPAP1	Q9NZP6	1156 aa		4.08	□□□□□ -1.76
ETFA-204	ENST00000557975	MRPS28	Q9Y2Q9	187 aa	Known RBP	4.08	□□□□□ -1.76
ETFA-204	ENST00000557975	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	LNP1	A1A4G5	178 aa		4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	PRR32	B1ATL7	298 aa		4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	HMBS	P08397	361 aa		4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	ACP2	P11117	423 aa		4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	CAPN3	P20807	821 aa		4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	CLNS1A	P54105	237 aa	Known RBP	4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	GEMIN4	P57678	1058 aa	Known RBP	4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	MC1R	Q01726	317 aa		4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	RRS1	Q15050	365 aa	Known RBP	4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	RAB41	Q5JT25	222 aa		4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	ZC2HC1B	Q5TFG8	222 aa		4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	ZNF772	Q68DY9	489 aa	Predicted RBP	4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	CORO6	Q6QEF8	472 aa		4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	NOTCH2NL	Q7Z3S9	236 aa		4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	FAM120B	Q96EK7	910 aa	Known RBP	4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	GIMAP5	Q96F15	307 aa		4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	TREX2	Q9BQ50	279 aa	Predicted RBP	4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	RTP3	Q9BQQ7	232 aa		4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	WDR13	Q9H1Z4	485 aa		4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	FGF22	Q9HCT0	170 aa		4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	ARHGEF38	Q9NXL2	777 aa		4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	PSD3	Q9NYI0	1048 aa		4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	FLRT3	Q9NZU0	649 aa		4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	SEC63	Q9UGP8	760 aa	Known RBP	4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	ZNF215	Q9UL58	517 aa	Predicted RBP	4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	GRIP1	Q9Y3R0	1128 aa		4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
ETFA-204	ENST00000557975	DNM1L	O00429	736 aa		4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	SLC22A2	O15244	555 aa		4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	ARHGEF9	O43307	516 aa		4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	TRMU	O75648	421 aa	Known RBP	4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	GJA1	P17302	382 aa		4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	CEACAM8	P31997	349 aa	Predicted RBP	4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	RXRG	P48443	463 aa		4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	GPR17	Q13304	367 aa		4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	IRF3	Q14653	427 aa		4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	PLEKHS1	Q5SXH7	462 aa		4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	DHRS7B	Q6IAN0	325 aa	Predicted RBP	4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	CPSF7	Q8N684	471 aa	Known RBP	4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	PAPD5	Q8NDF8	572 aa	Known RBP	4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	MCU	Q8NE86	351 aa		4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	OR1J1	Q8NGS3	322 aa		4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	ERLEC1	Q96DZ1	483 aa		4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	GFRA4	Q9GZZ7	299 aa		4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	SPATC1L	Q9H0A9	340 aa		4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	PELI2	Q9HAT8	420 aa		4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	HAUS2	Q9NVX0	235 aa		4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	LARS	Q9P2J5	1176 aa	Known RBP	4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	SUCLA2	Q9P2R7	463 aa	Predicted RBP	4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	HACL1	Q9UJ83	578 aa		4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	OSGIN1	Q9UJX0	560 aa		4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	ZNF148	Q9UQR1	794 aa		4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	KIAA1210	Q9ULL0	1709 aa		4.06	□□□□□ -1.76
ETFA-204	ENST00000557975	SNED1	Q8TER0	1413 aa		4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	FSD2	A1L4K1	749 aa		4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	T	O15178	435 aa		4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	PRAMEF11	O60813	436 aa		4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	TSPAN9	O75954	239 aa		4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	FAM157C	P0CG43	387 aa		4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	CEACAM1	P13688	526 aa		4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	ZNF26	P17031	533 aa	Predicted RBP	4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	MATR3	P43243	847 aa	Known RBP eCLIP	4.05	□□□□□ -1.76	3e-6	■■■□□ 19.1
ETFA-204	ENST00000557975	SUOX	P51687	545 aa		4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	PDX1	P52945	283 aa		4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	PNLIPRP2	P54317	469 aa		4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	SNRPD1	P62314	119 aa	Known RBP	4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	SIRPA	P78324	504 aa		4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	IRX1	P78414	480 aa	Predicted RBP	4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	CXCL9	Q07325	125 aa		4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	LGALS3BP	Q08380	585 aa		4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	TUBB2A	Q13885	445 aa		4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	NR1D2	Q14995	579 aa		4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	LINGO4	Q6UY18	593 aa		4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	LDB1	Q86U70	411 aa	Predicted RBP	4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	OR6C1	Q96RD1	312 aa		4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	OPRPN	Q99935	248 aa	Predicted RBP	4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	TUBB2B	Q9BVA1	445 aa		4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	EGLN1	Q9GZT9	426 aa		4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	KCNK15	Q9H427	330 aa		4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	OSGEPL1	Q9H4B0	414 aa		4.05	□□□□□ -1.76
ETFA-204	ENST00000557975	ACKR4	Q9NPB9	350 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms