RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 B4GAT1O43505 415 aa24.96■■□□□ 1.59
SMAD6-202ENST00000557916 GPC4O75487 556 aa24.96■■□□□ 1.59
SMAD6-202ENST00000557916 SPAG6O75602 509 aa24.96■■□□□ 1.59
SMAD6-202ENST00000557916 RPLP0P05388 317 aaKnown RBP24.96■■□□□ 1.59
SMAD6-202ENST00000557916 TUBB4BP68371 445 aa24.96■■□□□ 1.59
SMAD6-202ENST00000557916 CCL7P80098 99 aa24.96■■□□□ 1.59
SMAD6-202ENST00000557916 INSM1Q01101 510 aaPredicted RBP24.96■■□□□ 1.59
SMAD6-202ENST00000557916 KYNUQ16719 465 aa24.96■■□□□ 1.59
SMAD6-202ENST00000557916 PDZD3Q86UT5 571 aa24.96■■□□□ 1.59
SMAD6-202ENST00000557916 RBM12BQ8IXT5 1001 aaKnown RBP24.96■■□□□ 1.59
SMAD6-202ENST00000557916 CHCHD4Q8N4Q1 142 aa24.96■■□□□ 1.59
SMAD6-202ENST00000557916 CDKL2Q92772 493 aa24.96■■□□□ 1.59
SMAD6-202ENST00000557916 AARSD1Q9BTE6 412 aaKnown RBP24.96■■□□□ 1.59
SMAD6-202ENST00000557916 SYNDIG1Q9H7V2 258 aa24.96■■□□□ 1.59
SMAD6-202ENST00000557916 SMYD2Q9NRG4 433 aa24.96■■□□□ 1.59
SMAD6-202ENST00000557916 NSMCE4AQ9NXX6 385 aa24.96■■□□□ 1.59
SMAD6-202ENST00000557916 KCNK4Q9NYG8 393 aa24.96■■□□□ 1.59
SMAD6-202ENST00000557916 CDYLQ9Y232 598 aa24.96■■□□□ 1.59
SMAD6-202ENST00000557916 PSAT1Q9Y617 370 aa24.96■■□□□ 1.59
SMAD6-202ENST00000557916 RP1P56715 2156 aa24.96■■□□□ 1.59
SMAD6-202ENST00000557916 CASC3O15234 703 aaKnown RBP24.95■■□□□ 1.59
SMAD6-202ENST00000557916 PIAS1O75925 651 aa24.95■■□□□ 1.59
SMAD6-202ENST00000557916 ABCG1P45844 678 aa24.95■■□□□ 1.59
SMAD6-202ENST00000557916 PLEKHS1Q5SXH7 462 aa24.95■■□□□ 1.59
SMAD6-202ENST00000557916 DUS1LQ6P1R4 473 aaKnown RBP24.95■■□□□ 1.59
SMAD6-202ENST00000557916 TMEM26Q6ZUK4 368 aa24.95■■□□□ 1.59
SMAD6-202ENST00000557916 RAB44Q7Z6P3 723 aaPredicted RBP24.95■■□□□ 1.59
SMAD6-202ENST00000557916 STRA8Q7Z7C7 330 aa24.95■■□□□ 1.59
SMAD6-202ENST00000557916 SLC26A11Q86WA9 606 aa24.95■■□□□ 1.59
SMAD6-202ENST00000557916 SLC22A15Q8IZD6 547 aa24.95■■□□□ 1.59
SMAD6-202ENST00000557916 WDR48Q8TAF3 677 aa24.95■■□□□ 1.59
SMAD6-202ENST00000557916 KCNJ9Q92806 393 aa24.95■■□□□ 1.59
SMAD6-202ENST00000557916 LRRN3Q9H3W5 708 aa24.95■■□□□ 1.59
SMAD6-202ENST00000557916 UCK1Q9HA47 277 aa24.95■■□□□ 1.59
SMAD6-202ENST00000557916 LATS2Q9NRM7 1088 aa24.95■■□□□ 1.59
SMAD6-202ENST00000557916 NINJ2Q9NZG7 142 aa24.95■■□□□ 1.59
SMAD6-202ENST00000557916 GALPQ9UBC7 116 aa24.95■■□□□ 1.59
SMAD6-202ENST00000557916 HEBP2Q9Y5Z4 205 aa24.95■■□□□ 1.59
SMAD6-202ENST00000557916 STX2P32856 288 aa24.95■■□□□ 1.58
SMAD6-202ENST00000557916 CLDN6P56747 220 aa24.95■■□□□ 1.58
SMAD6-202ENST00000557916 FOXC1Q12948 553 aa24.95■■□□□ 1.58
SMAD6-202ENST00000557916 KRT33BQ14525 404 aa24.95■■□□□ 1.58
SMAD6-202ENST00000557916 AMZ1Q400G9 498 aa24.95■■□□□ 1.58
SMAD6-202ENST00000557916 ERMP1Q7Z2K6 904 aa24.95■■□□□ 1.58
SMAD6-202ENST00000557916 VRK3Q8IV63 474 aa24.95■■□□□ 1.58
SMAD6-202ENST00000557916 ZBTB2Q8N680 514 aa24.95■■□□□ 1.58
SMAD6-202ENST00000557916 TFGQ92734 400 aaPredicted RBP24.95■■□□□ 1.58
SMAD6-202ENST00000557916 NDNQ99608 321 aa24.95■■□□□ 1.58
SMAD6-202ENST00000557916 MED16Q9Y2X0 877 aa24.95■■□□□ 1.58
SMAD6-202ENST00000557916 COLEC10Q9Y6Z7 277 aa24.95■■□□□ 1.58
SMAD6-202ENST00000557916 A0A1W2PQM1 296 aa24.94■■□□□ 1.58
SMAD6-202ENST00000557916 FAM159BA6NKW6 160 aa24.94■■□□□ 1.58
SMAD6-202ENST00000557916 CXorf49A8MYA2 514 aaPredicted RBP24.94■■□□□ 1.58
SMAD6-202ENST00000557916 SLCO2B1O94956 709 aa24.94■■□□□ 1.58
SMAD6-202ENST00000557916 ACADLP28330 430 aa24.94■■□□□ 1.58
SMAD6-202ENST00000557916 CLCN7P51798 805 aa24.94■■□□□ 1.58
SMAD6-202ENST00000557916 GPR18Q14330 331 aa24.94■■□□□ 1.58
SMAD6-202ENST00000557916 HES3Q5TGS1 186 aa24.94■■□□□ 1.58
SMAD6-202ENST00000557916 FBF1Q8TES7 1133 aa24.94■■□□□ 1.58
SMAD6-202ENST00000557916 GFM1Q96RP9 751 aaKnown RBP24.94■■□□□ 1.58
SMAD6-202ENST00000557916 CDC42EP4Q9H3Q1 356 aaKnown RBP24.94■■□□□ 1.58
SMAD6-202ENST00000557916 CORO1CQ9ULV4 474 aaPredicted RBP24.94■■□□□ 1.58
SMAD6-202ENST00000557916 CACNA1AO00555 2505 aa24.93■■□□□ 1.58
SMAD6-202ENST00000557916 SPEGQ15772 3267 aa24.93■■□□□ 1.58
SMAD6-202ENST00000557916 IGHV1OR21-1A0A087WYE8 117 aa24.93■■□□□ 1.58
SMAD6-202ENST00000557916 LILRA5A6NI73 299 aa24.93■■□□□ 1.58
SMAD6-202ENST00000557916 NTN3O00634 580 aaPredicted RBP24.93■■□□□ 1.58
SMAD6-202ENST00000557916 VPS26AO75436 327 aa24.93■■□□□ 1.58
SMAD6-202ENST00000557916 PHBP35232 272 aa24.93■■□□□ 1.58
SMAD6-202ENST00000557916 SLMAPQ14BN4 828 aa24.93■■□□□ 1.58
SMAD6-202ENST00000557916 KBTBD12Q3ZCT8 623 aa24.93■■□□□ 1.58
SMAD6-202ENST00000557916 RBM20Q5T481 1227 aaKnown RBP24.93■■□□□ 1.58
SMAD6-202ENST00000557916 CTAGE3PQ8IX95 158 aa24.93■■□□□ 1.58
SMAD6-202ENST00000557916 SIDT2Q8NBJ9 832 aaKnown RBP24.93■■□□□ 1.58
SMAD6-202ENST00000557916 PHC3Q8NDX5 983 aa24.93■■□□□ 1.58
SMAD6-202ENST00000557916 FERD3LQ96RJ6 166 aa24.93■■□□□ 1.58
SMAD6-202ENST00000557916 TBC1D10AQ9BXI6 508 aa24.93■■□□□ 1.58
SMAD6-202ENST00000557916 ANKZF1Q9H8Y5 726 aa24.93■■□□□ 1.58
SMAD6-202ENST00000557916 HYAL3O43820 417 aaPredicted RBP24.92■■□□□ 1.58
SMAD6-202ENST00000557916 MT-CO3P00414 261 aa24.92■■□□□ 1.58
SMAD6-202ENST00000557916 C1QAP02745 245 aa24.92■■□□□ 1.58
SMAD6-202ENST00000557916 ADRB1P08588 477 aa24.92■■□□□ 1.58
SMAD6-202ENST00000557916 NDUFS1P28331 727 aa24.92■■□□□ 1.58
SMAD6-202ENST00000557916 PPM1FP49593 454 aaPredicted RBP24.92■■□□□ 1.58
SMAD6-202ENST00000557916 EPHA4P54764 986 aa24.92■■□□□ 1.58
SMAD6-202ENST00000557916 GPLD1P80108 840 aa24.92■■□□□ 1.58
SMAD6-202ENST00000557916 SPIDRQ14159 915 aa24.92■■□□□ 1.58
SMAD6-202ENST00000557916 CDCP2Q5VXM1 449 aa24.92■■□□□ 1.58
SMAD6-202ENST00000557916 NKAIN2Q5VXU1 208 aa24.92■■□□□ 1.58
SMAD6-202ENST00000557916 TMPRSS12Q86WS5 348 aa24.92■■□□□ 1.58
SMAD6-202ENST00000557916 GALNT15Q8N3T1 639 aa24.92■■□□□ 1.58
SMAD6-202ENST00000557916 GPATCH11Q8N954 259 aa24.92■■□□□ 1.58
SMAD6-202ENST00000557916 EIF1ADQ8N9N8 165 aaKnown RBP24.92■■□□□ 1.58
SMAD6-202ENST00000557916 OR10G6Q8NH81 332 aa24.92■■□□□ 1.58
SMAD6-202ENST00000557916 ZFPM2Q8WW38 1151 aa24.92■■□□□ 1.58
SMAD6-202ENST00000557916 ATXN7L3BQ96GX2 97 aa24.92■■□□□ 1.58
SMAD6-202ENST00000557916 AHCYL2Q96HN2 611 aaKnown RBP24.92■■□□□ 1.58
SMAD6-202ENST00000557916 GPR21Q99679 349 aa24.92■■□□□ 1.58
SMAD6-202ENST00000557916 MVB12BQ9H7P6 319 aa24.92■■□□□ 1.58
SMAD6-202ENST00000557916 TXNDC16Q9P2K2 825 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms