RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 WDR74Q6RFH5 385 aaPredicted RBP13.38□□□□□ -0.27
SHMT2-234ENST00000557703 UNC5DQ6UXZ4 953 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 FAM83HQ6ZRV2 1179 aaPredicted RBP13.38□□□□□ -0.27
SHMT2-234ENST00000557703 LDB1Q86U70 411 aaPredicted RBP13.38□□□□□ -0.27
SHMT2-234ENST00000557703 PIM3Q86V86 326 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 CCDC25Q86WR0 208 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 DENND6AQ8IWF6 608 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 TBC1D21Q8IYX1 336 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 TFGQ92734 400 aaPredicted RBP13.38□□□□□ -0.27
SHMT2-234ENST00000557703 C12orf66Q96MD2 445 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 PWWP2AQ96N64 755 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 FOPNLQ96NB1 174 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 TMEM74Q96NL1 305 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 DEPDC7Q96QD5 511 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 GFM1Q96RP9 751 aaKnown RBP13.38□□□□□ -0.27
SHMT2-234ENST00000557703 CPNE1Q99829 537 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 TRIM56Q9BRZ2 755 aaKnown RBP13.38□□□□□ -0.27
SHMT2-234ENST00000557703 FUT8Q9BYC5 575 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 LRRN3Q9H3W5 708 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 KIR3DX1Q9H7L2 352 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 PLAC1Q9HBJ0 212 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 LRRC4CQ9HCJ2 640 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 KCNK4Q9NYG8 393 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 TAS2R13Q9NYV9 303 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 ZNF624Q9P2J8 865 aaPredicted RBP13.38□□□□□ -0.27
SHMT2-234ENST00000557703 WDR37Q9Y2I8 494 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 CRYL1Q9Y2S2 319 aa13.38□□□□□ -0.27
SHMT2-234ENST00000557703 TCRBV9S1A1TA0A576 114 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 FAM159BA6NKW6 160 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 MATN2O00339 956 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 TOX3O15405 576 aaPredicted RBP13.37□□□□□ -0.27
SHMT2-234ENST00000557703 DUX1O43812 170 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 HAUS5O94927 633 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 EML2O95834 649 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 ACADLP28330 430 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 CCNFP41002 786 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 CSE1LP55060 971 aaKnown RBP13.37□□□□□ -0.27
SHMT2-234ENST00000557703 MAZP56270 477 aaKnown RBP13.37□□□□□ -0.27
SHMT2-234ENST00000557703 HSPA14Q0VDF9 509 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 EIF3IQ13347 325 aaKnown RBP13.37□□□□□ -0.27
SHMT2-234ENST00000557703 KRT33BQ14525 404 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 GBX1Q14549 363 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 TCEA2Q15560 299 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 CTSL3PQ5NE16 218 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 TTC23LQ6PF05 361 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 RBM44Q6ZP01 1051 aaKnown RBP13.37□□□□□ -0.27
SHMT2-234ENST00000557703 TRMT10CQ7L0Y3 403 aaKnown RBP13.37□□□□□ -0.27
SHMT2-234ENST00000557703 CCDC91Q7Z6B0 441 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 PLXDC1Q8IUK5 500 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 CARFQ8N187 725 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 DCBLD1Q8N8Z6 715 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 ACVR1CQ8NER5 493 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 INPP5DQ92835 1189 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 CCDC97Q96F63 343 aaPredicted RBP13.37□□□□□ -0.27
SHMT2-234ENST00000557703 AHCYL2Q96HN2 611 aaKnown RBP13.37□□□□□ -0.27
SHMT2-234ENST00000557703 VPS39Q96JC1 886 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 INSM2Q96T92 566 aaPredicted RBP13.37□□□□□ -0.27
SHMT2-234ENST00000557703 CYTH2Q99418 400 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 AARSD1Q9BTE6 412 aaKnown RBP13.37□□□□□ -0.27
SHMT2-234ENST00000557703 WWP1Q9H0M0 922 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 TFB2MQ9H5Q4 396 aaKnown RBP13.37□□□□□ -0.27
SHMT2-234ENST00000557703 SCHIP1Q9P0W5 487 aaPredicted RBP13.37□□□□□ -0.27
SHMT2-234ENST00000557703 EPHA6Q9UF33 1036 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 CLCA2Q9UQC9 943 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 DHRS7Q9Y394 339 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 NEUROG3Q9Y4Z2 214 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 NCOR2Q9Y618 2525 aa13.37□□□□□ -0.27
SHMT2-234ENST00000557703 IGHV1OR21-1A0A087WYE8 117 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 MT-CO3P00414 261 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 RHOXF2BP0C7M4 288 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 JUPP14923 745 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 ALDH4A1P30038 563 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 SSTR1P30872 391 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 CCKBRP32239 447 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 MLLT3P42568 568 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-234ENST00000557703 RGS4P49798 205 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 INSM1Q01101 510 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-234ENST00000557703 BOP1Q14137 746 aaKnown RBP13.36□□□□□ -0.27
SHMT2-234ENST00000557703 SEPT7Q16181 437 aaKnown RBP13.36□□□□□ -0.27
SHMT2-234ENST00000557703 HP1BP3Q5SSJ5 553 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-234ENST00000557703 PERM1Q5SV97 790 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 FAM45BPQ6NSW5 357 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 TRMT10BQ6PF06 316 aaKnown RBP13.36□□□□□ -0.27
SHMT2-234ENST00000557703 DHRS13Q6UX07 377 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 XKR5Q6UX68 686 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 OR4D9Q8NGE8 314 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 OR5K2Q8NHB8 316 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 FAM45AQ8TCE6 357 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 PATE1Q8WXA2 126 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 ANKRD7Q92527 254 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 RHOXF2Q9BQY4 288 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 STRADBQ9C0K7 418 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 TRIT1Q9H3H1 467 aaKnown RBP13.36□□□□□ -0.27
SHMT2-234ENST00000557703 RHOJQ9H4E5 214 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 CAAP1Q9H8G2 361 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 POPDC3Q9HBV1 291 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 FBXO6Q9NRD1 293 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-234ENST00000557703 IMP3Q9NV31 184 aaKnown RBP13.36□□□□□ -0.27
SHMT2-234ENST00000557703 IL1RAPL1Q9NZN1 696 aa13.36□□□□□ -0.27
SHMT2-234ENST00000557703 PDP2Q9P2J9 529 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms