RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 SKAP2O75563 359 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-233ENST00000557529 ESRRBO95718 433 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 GUCA1CO95843 209 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 CHEK2O96017 543 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 ASGR2P07307 311 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 COL9A1P20849 921 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 EPHA3P29320 983 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 PRDX6P30041 224 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 ADSLP30566 484 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-233ENST00000557529 RPIAP49247 311 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 HNMTP50135 292 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 MNAT1P51948 309 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 AP1S2P56377 157 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 SGCGQ13326 291 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 TDGQ13569 410 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 UBAP2LQ14157 1087 aaKnown RBP12.23□□□□□ -0.45
SHMT2-233ENST00000557529 RBBP7Q16576 425 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 WSCD2Q2TBF2 565 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 MAP7D1Q3KQU3 841 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 LSM12Q3MHD2 195 aaKnown RBP12.23□□□□□ -0.45
SHMT2-233ENST00000557529 LEXMQ3ZCV2 418 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 SLC44A4Q53GD3 710 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 NXNQ6DKJ4 435 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 NEK5Q6P3R8 708 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 GPRIN3Q6ZVF9 776 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 TRIM74Q86UV6 250 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 TRAPPC5Q8IUR0 188 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 RASGRP3Q8IV61 690 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 VRK3Q8IV63 474 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 OR14C36Q8NHC7 312 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 DLG3Q92796 817 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 SIPA1Q96FS4 1042 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 COX14Q96I36 57 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 LINC00615Q96LM1 132 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-233ENST00000557529 C1QTNF2Q9BXJ5 285 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 CD244Q9BZW8 370 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 CD248Q9HCU0 757 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 TNFRSF12AQ9NP84 129 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 ARL15Q9NXU5 204 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 OPTCQ9UBM4 332 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 TAGLN3Q9UI15 199 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 PDE10AQ9Y233 779 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 ANGPTL3Q9Y5C1 460 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 CAPN7Q9Y6W3 813 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 F5P12259 2224 aa12.23□□□□□ -0.45
SHMT2-233ENST00000557529 PRR5-ARHGAP8B1AHC4 643 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 GPR89AB7ZAQ6 455 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 TAPBPO15533 448 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 LILRB5O75023 590 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 VPS4BO75351 444 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 MATN4O95460 622 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 OTCP00480 354 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 PCCBP05166 539 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 JUNP05412 331 aaKnown RBP12.22□□□□□ -0.45
SHMT2-233ENST00000557529 ENO1P06733 434 aaKnown RBP12.22□□□□□ -0.45
SHMT2-233ENST00000557529 GPR89BP0CG08 455 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 UROSP10746 265 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 ACADMP11310 421 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 PTPN4P29074 926 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 GGT5P36269 586 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 HSPA7P48741 367 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 ARHGAP8P85298 464 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 CDK3Q00526 305 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 MLLT1Q03111 559 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-233ENST00000557529 GTF2H2Q13888 395 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 CCINQ13939 588 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 PUS10Q3MIT2 529 aaKnown RBP12.22□□□□□ -0.45
SHMT2-233ENST00000557529 UGT3A2Q3SY77 523 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 TMEM259Q4ZIN3 620 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 FBXO48Q5FWF7 155 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 CLEC6AQ6EIG7 209 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 GTF2H2CQ6P1K8 395 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 GOLGA7Q7Z5G4 137 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 SYVN1Q86TM6 617 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 HEATR4Q86WZ0 1026 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 HORMAD1Q86X24 394 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 TREML1Q86YW5 311 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 SLC22A15Q8IZD6 547 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 CPSF7Q8N684 471 aaKnown RBP12.22□□□□□ -0.45
SHMT2-233ENST00000557529 PLA2G15Q8NCC3 412 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 TWIST2Q8WVJ9 160 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 ASB12Q8WXK4 309 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 C19orf60Q96EN9 201 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 LRCH3Q96II8 777 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 PPP1R36Q96LQ0 422 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 FOPNLQ96NB1 174 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 CCT7Q99832 543 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 ZBTB26Q9HCK0 441 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 ARHGEF3Q9NR81 526 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 ATXN10Q9UBB4 475 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 MMP17Q9ULZ9 603 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 DNAJC15Q9Y5T4 150 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 LAMA3Q16787 3333 aa12.22□□□□□ -0.45
SHMT2-233ENST00000557529 LRRK1Q38SD2 2015 aa12.21□□□□□ -0.45
SHMT2-233ENST00000557529 A0A1W2PQU0 124 aa12.21□□□□□ -0.45
SHMT2-233ENST00000557529 KLHL33A6NCF5 533 aa12.21□□□□□ -0.45
SHMT2-233ENST00000557529 K7EPI3 171 aa12.21□□□□□ -0.45
SHMT2-233ENST00000557529 PPP6CO00743 305 aa12.21□□□□□ -0.45
SHMT2-233ENST00000557529 NARSO43776 548 aaKnown RBP12.21□□□□□ -0.45
SHMT2-233ENST00000557529 CCNT2O60583 730 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms