RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 TTC4O95801 387 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 EML2O95834 649 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 RPN2P04844 631 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 MPOP05164 745 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 APOA4P06727 396 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 MTHFD1P11586 935 aaKnown RBP8.15□□□□□ -1.1
PSEN1-223ENST00000557511 PSMA3P25788 255 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 NMBRP28336 390 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 CCKBRP32239 447 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 LSSP48449 732 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 ARL4DP49703 201 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 CDKN1CP49918 316 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-223ENST00000557511 RNF144AP50876 292 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-223ENST00000557511 ARL4CP56559 192 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 PRKAA1Q13131 559 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 BOP1Q14137 746 aaKnown RBP8.15□□□□□ -1.1
PSEN1-223ENST00000557511 RTP5Q14D33 572 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 MORF4L2Q15014 288 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 RPE65Q16518 533 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 SNAP47Q5SQN1 464 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 NKAIN2Q5VXU1 208 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 ANKRD22Q5VYY1 191 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 KIAA0930Q6ICG6 404 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-223ENST00000557511 CYB5D1Q6P9G0 228 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 TTC23LQ6PF05 361 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 C11orf96Q7Z7L8 435 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 ZNF761Q86XN6 746 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-223ENST00000557511 MARCH9Q86YJ5 346 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 JAMLQ86YT9 394 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 SFTPA2Q8IWL1 248 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 LMNTD2Q8IXW0 634 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 PIANPQ8IYJ0 282 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 C17orf53Q8N3J3 647 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-223ENST00000557511 CLDN19Q8N6F1 224 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 NAT8LQ8N9F0 302 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 AGBL5Q8NDL9 886 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 OR4D9Q8NGE8 314 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 MDM1Q8TC05 714 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 RNF217Q8TC41 542 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 ZFPM2Q8WW38 1151 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 ZNF669Q96BR6 464 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-223ENST00000557511 STAMBPL1Q96FJ0 436 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 ZDHHC12Q96GR4 267 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 SNF8Q96H20 258 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 ZNF578Q96N58 590 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-223ENST00000557511 SERPINB12Q96P63 405 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 FERD3LQ96RJ6 166 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 TCF12Q99081 682 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 FOXP3Q9BZS1 431 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 TRIM31Q9BZY9 425 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 WWP1Q9H0M0 922 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 COG4Q9H9E3 785 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 RDH14Q9HBH5 336 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 UTP11Q9Y3A2 253 aaKnown RBP8.15□□□□□ -1.1
PSEN1-223ENST00000557511 LOXL2Q9Y4K0 774 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 PCDHB1Q9Y5F3 818 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 ENTPD2Q9Y5L3 495 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 MRFAP1Q9Y605 127 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 SPTBN2O15020 2390 aa8.15□□□□□ -1.1
PSEN1-223ENST00000557511 E5RI56 91 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 PLD2O14939 933 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 HGSO14964 777 aaPredicted RBP8.14□□□□□ -1.11
PSEN1-223ENST00000557511 TTI1O43156 1089 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 BRINP1O60477 761 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 AVILO75366 819 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 RASSF9O75901 435 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 USP1O94782 785 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 TMEM63AO94886 807 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 TNFSF15O95150 251 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 PRSS56P0CW18 603 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 TYRP1P17643 537 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 PGAM1P18669 254 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 CHRM3P20309 590 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 OGNP20774 298 aaKnown RBP8.14□□□□□ -1.11
PSEN1-223ENST00000557511 CD1CP29017 333 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 CA5AP35218 305 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 CD151P48509 253 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 LIMK2P53671 638 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 MAPK10P53779 464 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 EIF3BP55884 814 aaKnown RBP8.14□□□□□ -1.11
PSEN1-223ENST00000557511 UBE2IP63279 158 aaKnown RBP8.14□□□□□ -1.11
PSEN1-223ENST00000557511 CLN3Q13286 438 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 SQSTM1Q13501 440 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 TUBB2AQ13885 445 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 LONRF1Q17RB8 773 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 BBS9Q3SYG4 887 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 ANKRD20A4Q4UJ75 823 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 RNASEH2BQ5TBB1 312 aaKnown RBP8.14□□□□□ -1.11
PSEN1-223ENST00000557511 NEPROQ6NW34 567 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 WDR74Q6RFH5 385 aaPredicted RBP8.14□□□□□ -1.11
PSEN1-223ENST00000557511 CES3Q6UWW8 571 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 OTOAQ7RTW8 1153 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 CAND1Q86VP6 1230 aaKnown RBP8.14□□□□□ -1.11
PSEN1-223ENST00000557511 OOSP2Q86WS3 158 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 RAB42Q8N4Z0 105 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.14□□□□□ -1.11
PSEN1-223ENST00000557511 MNS1Q8NEH6 495 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 SPATA4Q8NEY3 305 aa8.14□□□□□ -1.11
PSEN1-223ENST00000557511 SKA2Q8WVK7 121 aaPredicted RBP8.14□□□□□ -1.11
PSEN1-223ENST00000557511 ASZ1Q8WWH4 475 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms