RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 HSD11B2P80365 405 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 TLE1Q04724 770 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 PRKAA1Q13131 559 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 DNASE1L3Q13609 305 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 ERV3-1Q14264 604 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 SPARCL1Q14515 664 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 PARP6Q2NL67 630 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 KCTD11Q693B1 232 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 CAPRIN2Q6IMN6 1127 aaKnown RBP13.81□□□□□ -0.2
SNX6-210ENST00000557341 PWWP2BQ6NUJ5 590 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 CFAP206Q8IYR0 622 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 D2HGDHQ8N465 521 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 LILRA3Q8N6C8 439 aaPredicted RBP13.81□□□□□ -0.2
SNX6-210ENST00000557341 ACVR1CQ8NER5 493 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 CT55Q8WUE5 264 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 DNAJC1Q96KC8 554 aaKnown RBP13.81□□□□□ -0.2
SNX6-210ENST00000557341 BAG1Q99933 345 aaPredicted RBP13.81□□□□□ -0.2
SNX6-210ENST00000557341 RBSNQ9H1K0 784 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 FAM96AQ9H5X1 160 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 LRRC40Q9H9A6 602 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 COG4Q9H9E3 785 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 SOHLH2Q9NX45 425 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 ZDHHC3Q9NYG2 299 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 ANAPC2Q9UJX6 822 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 PACSIN2Q9UNF0 486 aaPredicted RBP13.81□□□□□ -0.2
SNX6-210ENST00000557341 POLHQ9Y253 713 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 KCNMB2Q9Y691 235 aa13.81□□□□□ -0.2
SNX6-210ENST00000557341 CCDC88CQ9P219 2028 aa13.8□□□□□ -0.2
SNX6-210ENST00000557341 IGLV3-16A0A075B6K0 115 aa13.8□□□□□ -0.2
SNX6-210ENST00000557341 TRBV5-4A0A0C4DH59 114 aa13.8□□□□□ -0.2
SNX6-210ENST00000557341 CPNE3O75131 537 aaKnown RBP13.8□□□□□ -0.2
SNX6-210ENST00000557341 KPNA2P52292 529 aaKnown RBP13.8□□□□□ -0.2
SNX6-210ENST00000557341 TUBB4BP68371 445 aa13.8□□□□□ -0.2
SNX6-210ENST00000557341 KIF5AQ12840 1032 aa13.8□□□□□ -0.2
SNX6-210ENST00000557341 KLF1Q13351 362 aaPredicted RBP13.8□□□□□ -0.2
SNX6-210ENST00000557341 TUBB2AQ13885 445 aa13.8□□□□□ -0.2
SNX6-210ENST00000557341 LACTB2Q53H82 288 aaPredicted RBP13.8□□□□□ -0.2
SNX6-210ENST00000557341 ZRANB3Q5FWF4 1079 aa13.8□□□□□ -0.2
SNX6-210ENST00000557341 TMTC4Q5T4D3 741 aa13.8□□□□□ -0.2
SNX6-210ENST00000557341 CERS6Q6ZMG9 384 aa13.8□□□□□ -0.2
SNX6-210ENST00000557341 FAM71DQ8N9W8 422 aa13.8□□□□□ -0.2
SNX6-210ENST00000557341 SEC14L1Q92503 715 aa13.8□□□□□ -0.2
SNX6-210ENST00000557341 ABHD17AQ96GS6 310 aa13.8□□□□□ -0.2
SNX6-210ENST00000557341 TUBB2BQ9BVA1 445 aa13.8□□□□□ -0.2
SNX6-210ENST00000557341 FANCEQ9HB96 536 aa13.8□□□□□ -0.2
SNX6-210ENST00000557341 ZNF71Q9NQZ8 489 aaPredicted RBP13.8□□□□□ -0.2
SNX6-210ENST00000557341 NLE1Q9NVX2 485 aaPredicted RBP13.8□□□□□ -0.2
SNX6-210ENST00000557341 POMT2Q9UKY4 750 aa13.8□□□□□ -0.2
SNX6-210ENST00000557341 HECTD1Q9ULT8 2610 aa13.8□□□□□ -0.2
SNX6-210ENST00000557341 CDC14CA4D256 554 aa13.79□□□□□ -0.2
SNX6-210ENST00000557341 IFRD1O00458 451 aaPredicted RBP13.79□□□□□ -0.2
SNX6-210ENST00000557341 CREG1O75629 220 aa13.79□□□□□ -0.2
SNX6-210ENST00000557341 SCRG1O75711 98 aa13.79□□□□□ -0.2
SNX6-210ENST00000557341 METTL18O95568 372 aa13.79□□□□□ -0.2
SNX6-210ENST00000557341 FTCDO95954 541 aa13.79□□□□□ -0.2
SNX6-210ENST00000557341 RECKO95980 971 aa13.79□□□□□ -0.2
SNX6-210ENST00000557341 NTRK1P04629 796 aa13.79□□□□□ -0.2
SNX6-210ENST00000557341 FURINP09958 794 aa13.79□□□□□ -0.2
SNX6-210ENST00000557341 POLR2CP19387 275 aaPredicted RBP13.79□□□□□ -0.2
SNX6-210ENST00000557341 CDH3P22223 829 aa13.79□□□□□ -0.2
SNX6-210ENST00000557341 ARCN1P48444 511 aaKnown RBP13.79□□□□□ -0.2
SNX6-210ENST00000557341 POU6F1Q14863 301 aa13.79□□□□□ -0.2
SNX6-210ENST00000557341 GPR19Q15760 415 aa13.79□□□□□ -0.2
SNX6-210ENST00000557341 ZNF449Q6P9G9 518 aa13.79□□□□□ -0.2
SNX6-210ENST00000557341 SERPINA9Q86WD7 417 aa13.79□□□□□ -0.2
SNX6-210ENST00000557341 TMEM126BQ8IUX1 230 aa13.79□□□□□ -0.2
SNX6-210ENST00000557341 TMEM139Q8IV31 216 aa13.79□□□□□ -0.2
SNX6-210ENST00000557341 OR8K5Q8NH50 307 aa13.79□□□□□ -0.2
SNX6-210ENST00000557341 STYXQ8WUJ0 223 aa13.79□□□□□ -0.2
SNX6-210ENST00000557341 TMEM121Q9BTD3 319 aa13.79□□□□□ -0.2
SNX6-210ENST00000557341 TWSG1Q9GZX9 223 aa13.79□□□□□ -0.2
SNX6-210ENST00000557341 EPN3Q9H201 632 aa13.79□□□□□ -0.2
SNX6-210ENST00000557341 ACTL8Q9H568 366 aa13.79□□□□□ -0.2
SNX6-210ENST00000557341 LATS2Q9NRM7 1088 aa13.79□□□□□ -0.2
SNX6-210ENST00000557341 C1GALT1Q9NS00 363 aa13.79□□□□□ -0.2
SNX6-210ENST00000557341 BTRCQ9Y297 605 aa13.79□□□□□ -0.2
SNX6-210ENST00000557341 MED13Q9UHV7 2174 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 RELNP78509 3460 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 GSAPA4D1B5 854 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 MKRN2OSH3BPM6 223 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 DDX3YO15523 660 aaKnown RBP13.78□□□□□ -0.2
SNX6-210ENST00000557341 PSMD3O43242 534 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 AP2A1O95782 977 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 GSTM1P09488 218 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 CASRP41180 1078 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 CDKN1CP49918 316 aaPredicted RBP13.78□□□□□ -0.2
SNX6-210ENST00000557341 PMS2P54278 862 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 GDF10P55107 478 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 GSTM4Q03013 218 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 CACNG1Q06432 222 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 RPA4Q13156 261 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 SKIDA1Q1XH10 827 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 TAS2R42Q7RTR8 314 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 OR4E2Q8NGC2 313 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 SLC35B2Q8TB61 432 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 LCN9Q8WX39 176 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 ZNF501Q96CX3 271 aaPredicted RBP13.78□□□□□ -0.2
SNX6-210ENST00000557341 ALS2CR12Q96Q35 445 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 FERD3LQ96RJ6 166 aa13.78□□□□□ -0.2
SNX6-210ENST00000557341 DESI2Q9BSY9 194 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms