RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	KMT5C	Q86Y97	462 aa		10.88	□□□□□ -0.67
HNRNPC-231	ENST00000557336	OR4K2	Q8NGD2	314 aa		10.88	□□□□□ -0.67
HNRNPC-231	ENST00000557336	OR2L2	Q8NH16	312 aa		10.88	□□□□□ -0.67
HNRNPC-231	ENST00000557336	ADAMTS17	Q8TE56	1095 aa		10.88	□□□□□ -0.67
HNRNPC-231	ENST00000557336	P3H4	Q92791	437 aa		10.88	□□□□□ -0.67
HNRNPC-231	ENST00000557336	LINC00615	Q96LM1	132 aa	Predicted RBP	10.88	□□□□□ -0.67
HNRNPC-231	ENST00000557336	VAT1	Q99536	393 aa		10.88	□□□□□ -0.67
HNRNPC-231	ENST00000557336	APOL2	Q9BQE5	337 aa		10.88	□□□□□ -0.67
HNRNPC-231	ENST00000557336	HEMGN	Q9BXL5	484 aa		10.88	□□□□□ -0.67
HNRNPC-231	ENST00000557336	KIR3DX1	Q9H7L2	352 aa		10.88	□□□□□ -0.67
HNRNPC-231	ENST00000557336	PDE7B	Q9NP56	450 aa		10.88	□□□□□ -0.67
HNRNPC-231	ENST00000557336	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	10.88	□□□□□ -0.67	1e-9	■■■□□ 15.2
HNRNPC-231	ENST00000557336	FKBPL	Q9UIM3	349 aa		10.88	□□□□□ -0.67
HNRNPC-231	ENST00000557336	RARRES3	Q9UL19	164 aa		10.88	□□□□□ -0.67
HNRNPC-231	ENST00000557336	PCSK5	Q92824	1860 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	OR6C74	A6NCV1	312 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	HACD1	B0YJ81	288 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	STX7	O15400	261 aa	Known RBP	10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	SRP72	O76094	671 aa	Known RBP	10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	ZRANB2	O95218	330 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	PRAMEF1	O95521	474 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	MT-ND3	P03897	115 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	TPM3	P06753	285 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	PTPN4	P29074	926 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	TUBB4B	P68371	445 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	HSD11B2	P80365	405 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	ACY1	Q03154	408 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	ABR	Q12979	859 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	CHAF1B	Q13112	559 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	ITGA9	Q13797	1035 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	TUBB2A	Q13885	445 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	NR6A1	Q15406	480 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	BCL7A	Q4VC05	210 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	DNTTIP2	Q5QJE6	756 aa	Known RBP	10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	PLEKHS1	Q5SXH7	462 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	BPHL	Q86WA6	291 aa	Predicted RBP	10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	KLHDC8B	Q8IXV7	354 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	RCOR2	Q8IZ40	523 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	TC2N	Q8N9U0	490 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	OR13C4	Q8NGS5	318 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	ZFPM2	Q8WW38	1151 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	C12orf66	Q96MD2	445 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	CD180	Q99467	661 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	TUBB2B	Q9BVA1	445 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	FICD	Q9BVA6	458 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	GPR87	Q9BY21	358 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	ZCCHC2	Q9C0B9	1178 aa	Known RBP	10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	GBA3	Q9H227	469 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	CHST8	Q9H2A9	424 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	RSPH14	Q9UHP6	348 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	TRHDE	Q9UKU6	1024 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	ACSL5	Q9ULC5	683 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	BTRC	Q9Y297	605 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	PKP3	Q9Y446	797 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	LRBA	P50851	2863 aa		10.87	□□□□□ -0.67
HNRNPC-231	ENST00000557336	DOPEY1	Q5JWR5	2465 aa		10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	SLC9B1P1	A6NJY1	282 aa		10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	APOC4-APOC2	K7ER74	178 aa		10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	CCL22	O00626	93 aa		10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	CBFA2T2	O43439	604 aa		10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	APOC2	P02655	101 aa		10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	POLB	P06746	335 aa		10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	PRSS56	P0CW18	603 aa		10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	LPO	P22079	712 aa	Predicted RBP	10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	RORA	P35398	523 aa		10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	MAGEA1	P43355	309 aa		10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	UQCRFS1	P47985	274 aa		10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	CDKN1C	P49918	316 aa	Predicted RBP	10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	ZNF140	P52738	457 aa	Predicted RBP	10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	XRCC4	Q13426	336 aa		10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	PLCL1	Q15111	1095 aa		10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	TAF1A	Q15573	450 aa	Predicted RBP	10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	LONRF2	Q1L5Z9	754 aa		10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	PAPD7	Q5XG87	772 aa	Known RBP	10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	KLHL35	Q6PF15	583 aa		10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	TEX19	Q8NA77	164 aa		10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	ZNF511	Q8NB15	262 aa		10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	FAM118B	Q9BPY3	351 aa		10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	FAM96A	Q9H5X1	160 aa		10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	ASB8	Q9H765	288 aa		10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	KCND1	Q9NSA2	647 aa		10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	FAM8A1	Q9UBU6	413 aa		10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	POMT2	Q9UKY4	750 aa		10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	FARSA	Q9Y285	508 aa	Known RBP	10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	TNRC6A	Q8NDV7	1962 aa	Known RBP	10.86	□□□□□ -0.67
HNRNPC-231	ENST00000557336	HIVEP3	Q5T1R4	2406 aa		10.85	□□□□□ -0.67
HNRNPC-231	ENST00000557336	MYO9A	B2RTY4	2548 aa		10.85	□□□□□ -0.67
HNRNPC-231	ENST00000557336	SHANK1	Q9Y566	2161 aa		10.85	□□□□□ -0.67
HNRNPC-231	ENST00000557336	IGLV3-16	A0A075B6K0	115 aa		10.85	□□□□□ -0.67
HNRNPC-231	ENST00000557336	UBA6	A0AVT1	1052 aa	Predicted RBP	10.85	□□□□□ -0.67
HNRNPC-231	ENST00000557336	C5orf60	A6NFR6	353 aa		10.85	□□□□□ -0.67
HNRNPC-231	ENST00000557336	AKR1B15	C9JRZ8	316 aa	Predicted RBP	10.85	□□□□□ -0.67
HNRNPC-231	ENST00000557336	BTN3A3	O00478	584 aa		10.85	□□□□□ -0.67
HNRNPC-231	ENST00000557336	LDB2	O43679	373 aa		10.85	□□□□□ -0.67
HNRNPC-231	ENST00000557336	SCRG1	O75711	98 aa		10.85	□□□□□ -0.67
HNRNPC-231	ENST00000557336	CEACAM4	O75871	244 aa		10.85	□□□□□ -0.67
HNRNPC-231	ENST00000557336	ZBTB11	O95625	1053 aa	Predicted RBP	10.85	□□□□□ -0.67
HNRNPC-231	ENST00000557336	GP1BB	P13224	206 aa		10.85	□□□□□ -0.67
HNRNPC-231	ENST00000557336	POLR2C	P19387	275 aa	Predicted RBP	10.85	□□□□□ -0.67
HNRNPC-231	ENST00000557336	MSH3	P20585	1137 aa		10.85	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms