RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 TRIB3Q96RU7 358 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 ADGRE3Q9BY15 652 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 SLAMF7Q9NQ25 335 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 DTLQ9NZJ0 730 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 PKD2L2Q9NZM6 624 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 UVRAGQ9P2Y5 699 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 CPNE7Q9UBL6 633 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 ZNHIT2Q9UHR6 403 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 CORINQ9Y5Q5 1042 aa9.83□□□□□ -0.84
SCFD1-220ENST00000556486 SETD2Q9BYW2 2564 aaPredicted RBP9.82□□□□□ -0.84
SCFD1-220ENST00000556486 GOLGA6L3A6NEY3 463 aa9.82□□□□□ -0.84
SCFD1-220ENST00000556486 A6NL46 340 aa9.82□□□□□ -0.84
SCFD1-220ENST00000556486 GRID2O43424 1007 aa9.82□□□□□ -0.84
SCFD1-220ENST00000556486 KIF1CO43896 1103 aaKnown RBP9.82□□□□□ -0.84
SCFD1-220ENST00000556486 TIAF1O95411 115 aa9.82□□□□□ -0.84
SCFD1-220ENST00000556486 SERPINC1P01008 464 aa9.82□□□□□ -0.84
SCFD1-220ENST00000556486 XRCC1P18887 633 aaPredicted RBP9.82□□□□□ -0.84
SCFD1-220ENST00000556486 LEPRP48357 1165 aaKnown RBP9.82□□□□□ -0.84
SCFD1-220ENST00000556486 SLC10A2Q12908 348 aaPredicted RBP9.82□□□□□ -0.84
SCFD1-220ENST00000556486 LONRF2Q1L5Z9 754 aa9.82□□□□□ -0.84
SCFD1-220ENST00000556486 ATP13A4Q4VNC1 1196 aa9.82□□□□□ -0.84
SCFD1-220ENST00000556486 WIPI1Q5MNZ9 446 aaPredicted RBP9.82□□□□□ -0.84
SCFD1-220ENST00000556486 ZNF468Q5VIY5 522 aaPredicted RBP9.82□□□□□ -0.84
SCFD1-220ENST00000556486 JMJD6Q6NYC1 403 aaPredicted RBP9.82□□□□□ -0.84
SCFD1-220ENST00000556486 WASH2PQ6VEQ5 465 aa9.82□□□□□ -0.84
SCFD1-220ENST00000556486 UNC5AQ6ZN44 842 aa9.82□□□□□ -0.84
SCFD1-220ENST00000556486 CHST15Q7LFX5 561 aaPredicted RBP9.82□□□□□ -0.84
SCFD1-220ENST00000556486 PLXDC1Q8IUK5 500 aa9.82□□□□□ -0.84
SCFD1-220ENST00000556486 PHYKPLQ8IUZ5 450 aa9.82□□□□□ -0.84
SCFD1-220ENST00000556486 KCTD6Q8NC69 237 aa9.82□□□□□ -0.84
SCFD1-220ENST00000556486 LPCAT1Q8NF37 534 aa9.82□□□□□ -0.84
SCFD1-220ENST00000556486 ZSCAN5AQ9BUG6 496 aa9.82□□□□□ -0.84
SCFD1-220ENST00000556486 MLPHQ9BV36 600 aaPredicted RBP9.82□□□□□ -0.84
SCFD1-220ENST00000556486 UNKQ9C0B0 810 aaKnown RBP9.82□□□□□ -0.84
SCFD1-220ENST00000556486 XPO4Q9C0E2 1151 aaKnown RBP9.82□□□□□ -0.84
SCFD1-220ENST00000556486 MAGEE1Q9HCI5 957 aa9.82□□□□□ -0.84
SCFD1-220ENST00000556486 TRIM39Q9HCM9 518 aa9.82□□□□□ -0.84
SCFD1-220ENST00000556486 WASH6PQ9NQA3 447 aa9.82□□□□□ -0.84
SCFD1-220ENST00000556486 RAD18Q9NS91 495 aa9.82□□□□□ -0.84
SCFD1-220ENST00000556486 REV1Q9UBZ9 1251 aa9.82□□□□□ -0.84
SCFD1-220ENST00000556486 NF1P21359 2839 aa9.82□□□□□ -0.84
SCFD1-220ENST00000556486 F5H423 210 aaPredicted RBP9.81□□□□□ -0.84
SCFD1-220ENST00000556486 SPAG6O75602 509 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 RASSF9O75901 435 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 GYPCP04921 128 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 ACP5P13686 325 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 ZNF8P17098 575 aaPredicted RBP9.81□□□□□ -0.84
SCFD1-220ENST00000556486 IL11RAQ14626 422 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 TM4SF20Q53R12 229 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 AGAP9Q5VTM2 703 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 SLC9A4Q6AI14 798 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 ABRAXAS1Q6UWZ7 409 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 TMC3Q7Z5M5 1100 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 APLFQ8IW19 511 aaPredicted RBP9.81□□□□□ -0.84
SCFD1-220ENST00000556486 RBM12BQ8IXT5 1001 aaKnown RBP9.81□□□□□ -0.84
SCFD1-220ENST00000556486 TRAM1L1Q8N609 369 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 PLD5Q8N7P1 536 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 DTX3LQ8TDB6 740 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 NINJ1Q92982 152 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 IMP4Q96G21 291 aaKnown RBP9.81□□□□□ -0.84
SCFD1-220ENST00000556486 C9orf72Q96LT7 481 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 C5orf34Q96MH7 638 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 OLFM3Q96PB7 478 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 RNF157Q96PX1 679 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 PLEKHG4BQ96PX9 1271 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 TIMM29Q9BSF4 260 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 SLC29A3Q9BZD2 475 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 RAB33BQ9H082 229 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 ARFGAP3Q9NP61 516 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 ACSS2Q9NR19 701 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 OGFRQ9NZT2 677 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 SEMA5BQ9P283 1151 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 ATXN10Q9UBB4 475 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 EPHA6Q9UF33 1036 aa9.81□□□□□ -0.84
SCFD1-220ENST00000556486 LUC7L2Q9Y383 392 aaKnown RBP9.81□□□□□ -0.84
SCFD1-220ENST00000556486 F8P00451 2351 aa9.8□□□□□ -0.84
SCFD1-220ENST00000556486 KCNK1O00180 336 aa9.8□□□□□ -0.84
SCFD1-220ENST00000556486 ZNF185O15231 689 aa9.8□□□□□ -0.84
SCFD1-220ENST00000556486 VEGFDO43915 354 aa9.8□□□□□ -0.84
SCFD1-220ENST00000556486 JCHAINP01591 159 aa9.8□□□□□ -0.84
SCFD1-220ENST00000556486 H2AFZP0C0S5 128 aa9.8□□□□□ -0.84
SCFD1-220ENST00000556486 EPHA1P21709 976 aa9.8□□□□□ -0.84
SCFD1-220ENST00000556486 LORP23490 312 aaPredicted RBP9.8□□□□□ -0.84
SCFD1-220ENST00000556486 KDELR1P24390 212 aa9.8□□□□□ -0.84
SCFD1-220ENST00000556486 CD86P42081 329 aa9.8□□□□□ -0.84
SCFD1-220ENST00000556486 TAS2R40P59535 323 aa9.8□□□□□ -0.84
SCFD1-220ENST00000556486 ZBTB17Q13105 803 aa9.8□□□□□ -0.84
SCFD1-220ENST00000556486 KCNAB1Q14722 419 aa9.8□□□□□ -0.84
SCFD1-220ENST00000556486 ASTE1Q2TB18 679 aaPredicted RBP9.8□□□□□ -0.84
SCFD1-220ENST00000556486 PLA2G4EQ3MJ16 856 aa9.8□□□□□ -0.84
SCFD1-220ENST00000556486 ZC3H12BQ5HYM0 836 aaKnown RBP9.8□□□□□ -0.84
SCFD1-220ENST00000556486 ZNF569Q5MCW4 686 aa9.8□□□□□ -0.84
SCFD1-220ENST00000556486 SLC6A19Q695T7 634 aa9.8□□□□□ -0.84
SCFD1-220ENST00000556486 FAM92BQ6ZTR7 304 aa9.8□□□□□ -0.84
SCFD1-220ENST00000556486 TMEM26Q6ZUK4 368 aa9.8□□□□□ -0.84
SCFD1-220ENST00000556486 H2AFVQ71UI9 128 aa9.8□□□□□ -0.84
SCFD1-220ENST00000556486 PRSS42Q7Z5A4 293 aa9.8□□□□□ -0.84
SCFD1-220ENST00000556486 ADGRG6Q86SQ4 1221 aa9.8□□□□□ -0.84
SCFD1-220ENST00000556486 CPNE8Q86YQ8 564 aa9.8□□□□□ -0.84
SCFD1-220ENST00000556486 TTC30BQ8N4P2 665 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms