RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 TIAL1Q01085 375 aaKnown RBP eCLIP8.45□□□□□ -1.06
MARK3-210ENST00000556463 BTN1A1Q13410 526 aa8.45□□□□□ -1.06
MARK3-210ENST00000556463 TOP3AQ13472 1001 aaPredicted RBP8.45□□□□□ -1.06
MARK3-210ENST00000556463 EIF4EBP2Q13542 120 aaPredicted RBP8.45□□□□□ -1.06
MARK3-210ENST00000556463 NPTX1Q15818 432 aa8.45□□□□□ -1.06
MARK3-210ENST00000556463 CYP51A1Q16850 503 aa8.45□□□□□ -1.06
MARK3-210ENST00000556463 LY6KQ17RY6 165 aa8.45□□□□□ -1.06
MARK3-210ENST00000556463 CTU2Q2VPK5 515 aaKnown RBP8.45□□□□□ -1.06
MARK3-210ENST00000556463 RBM20Q5T481 1227 aaKnown RBP8.45□□□□□ -1.06
MARK3-210ENST00000556463 SYPL2Q5VXT5 272 aa8.45□□□□□ -1.06
MARK3-210ENST00000556463 CLEC6AQ6EIG7 209 aa8.45□□□□□ -1.06
MARK3-210ENST00000556463 PM20D1Q6GTS8 502 aa8.45□□□□□ -1.06
MARK3-210ENST00000556463 PRSS48Q7RTY5 328 aa8.45□□□□□ -1.06
MARK3-210ENST00000556463 THAP5Q7Z6K1 395 aa8.45□□□□□ -1.06
MARK3-210ENST00000556463 GALNT13Q8IUC8 556 aa8.45□□□□□ -1.06
MARK3-210ENST00000556463 LINC00469Q8N7U9 141 aa8.45□□□□□ -1.06
MARK3-210ENST00000556463 GALNT11Q8NCW6 608 aa8.45□□□□□ -1.06
MARK3-210ENST00000556463 OR6Q1Q8NGQ2 317 aa8.45□□□□□ -1.06
MARK3-210ENST00000556463 PHF10Q8WUB8 498 aaKnown RBP8.45□□□□□ -1.06
MARK3-210ENST00000556463 YIPF6Q96EC8 236 aa8.45□□□□□ -1.06
MARK3-210ENST00000556463 OR2B2Q9GZK3 357 aa8.45□□□□□ -1.06
MARK3-210ENST00000556463 RIBC2Q9H4K1 309 aa8.45□□□□□ -1.06
MARK3-210ENST00000556463 NECTIN3Q9NQS3 549 aa8.45□□□□□ -1.06
MARK3-210ENST00000556463 PAK1IP1Q9NWT1 392 aaPredicted RBP8.45□□□□□ -1.06
MARK3-210ENST00000556463 ANAPC2Q9UJX6 822 aa8.45□□□□□ -1.06
MARK3-210ENST00000556463 FBXW11Q9UKB1 542 aa8.45□□□□□ -1.06
MARK3-210ENST00000556463 MCM3APO60318 1980 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 NYNRINQ9P2P1 1898 aaKnown RBP8.44□□□□□ -1.06
MARK3-210ENST00000556463 C19orf81C9J6K1 198 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 PIRO00625 290 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 MTHFD1P11586 935 aaKnown RBP8.44□□□□□ -1.06
MARK3-210ENST00000556463 CPB1P15086 417 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 CLCN3P51790 818 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 ZNF280AP59817 542 aaPredicted RBP8.44□□□□□ -1.06
MARK3-210ENST00000556463 HERVK_113P63132 956 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 EMX2Q04743 252 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 EFR3AQ14156 821 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 GRB7Q14451 532 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 FAM83EQ2M2I3 478 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 C6orf141Q5SZD1 244 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 PAQR9Q6ZVX9 377 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 PDZD4Q76G19 769 aaPredicted RBP8.44□□□□□ -1.06
MARK3-210ENST00000556463 PROSER1Q86XN7 944 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 DYNC2LI1Q8TCX1 351 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 TRAPPC12Q8WVT3 735 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 TM9SF2Q99805 663 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 ERVK-6Q9BXR3 956 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 TRIM8Q9BZR9 551 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 WASH6PQ9NQA3 447 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 CHST12Q9NRB3 414 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 SPATA6Q9NWH7 488 aaPredicted RBP8.44□□□□□ -1.06
MARK3-210ENST00000556463 SLC2A6Q9UGQ3 507 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 CYB5R1Q9UHQ9 305 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 HSPB11Q9Y547 144 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 TNS1Q9HBL0 1735 aaKnown RBP8.44□□□□□ -1.06
MARK3-210ENST00000556463 GBF1Q92538 1859 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 PLK4O00444 970 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 CDK14O94921 469 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 NDST3O95803 873 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 LDLRP01130 860 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 CHRM3P20309 590 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 GALK2Q01415 458 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 SNTA1Q13424 505 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 DAG1Q14118 895 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 RANBP10Q6VN20 620 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 NUDT18Q6ZVK8 323 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 DGLUCYQ7Z3D6 616 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 MIER2Q8N344 545 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 GRPEL2Q8TAA5 225 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 ASZ1Q8WWH4 475 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 ASB2Q96Q27 587 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 GAD1Q99259 594 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 TBL1YQ9BQ87 522 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 APOL2Q9BQE5 337 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 UCK2Q9BZX2 261 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 AMBRA1Q9C0C7 1298 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 ARNT2Q9HBZ2 717 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 MYOZ2Q9NPC6 264 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 OSER1Q9NX31 292 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 HCN4Q9Y3Q4 1203 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 PCDHB3Q9Y5E6 796 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 ANKRD36A6QL64 1941 aa8.44□□□□□ -1.06
MARK3-210ENST00000556463 E9PQ18 207 aa8.43□□□□□ -1.06
MARK3-210ENST00000556463 STMND1H3BQB6 276 aa8.43□□□□□ -1.06
MARK3-210ENST00000556463 POLR1CO15160 346 aaPredicted RBP8.43□□□□□ -1.06
MARK3-210ENST00000556463 HBP1O60381 514 aa8.43□□□□□ -1.06
MARK3-210ENST00000556463 BMP4P12644 408 aa8.43□□□□□ -1.06
MARK3-210ENST00000556463 LMO2P25791 158 aa8.43□□□□□ -1.06
MARK3-210ENST00000556463 SUOXP51687 545 aa8.43□□□□□ -1.06
MARK3-210ENST00000556463 ATN1P54259 1190 aaPredicted RBP8.43□□□□□ -1.06
MARK3-210ENST00000556463 ISL1P61371 349 aa8.43□□□□□ -1.06
MARK3-210ENST00000556463 CAPRIN1Q14444 709 aaKnown RBP8.43□□□□□ -1.06
MARK3-210ENST00000556463 HIST2H2ACQ16777 129 aaPredicted RBP8.43□□□□□ -1.06
MARK3-210ENST00000556463 AASDHQ4L235 1098 aaPredicted RBP8.43□□□□□ -1.06
MARK3-210ENST00000556463 ZNF789Q5FWF6 425 aa8.43□□□□□ -1.06
MARK3-210ENST00000556463 ATAD3CQ5T2N8 411 aa8.43□□□□□ -1.06
MARK3-210ENST00000556463 SLX4IPQ5VYV7 408 aa8.43□□□□□ -1.06
MARK3-210ENST00000556463 DPY19L3Q6ZPD9 716 aa8.43□□□□□ -1.06
MARK3-210ENST00000556463 BEND5Q7L4P6 421 aa8.43□□□□□ -1.06
MARK3-210ENST00000556463 BHLHA9Q7RTU4 235 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms