RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 APOBEC3GQ9HC16 384 aaKnown RBP5.15□□□□□ -1.59
SRP54-211ENST00000556445 GPR35Q9HC97 309 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 MED4Q9NPJ6 270 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 FAM114A2Q9NRY5 505 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 CISHQ9NSE2 258 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 SIRT3Q9NTG7 399 aaPredicted RBP5.15□□□□□ -1.59
SRP54-211ENST00000556445 PARVAQ9NVD7 372 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 TAS2R14Q9NYV8 317 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 ADAM22Q9P0K1 906 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 KCND3Q9UK17 655 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 LIPT1Q9Y234 373 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.15□□□□□ -1.59
SRP54-211ENST00000556445 UTP11Q9Y3A2 253 aaKnown RBP5.15□□□□□ -1.59
SRP54-211ENST00000556445 RALGAPA2Q2PPJ7 1873 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 DOCK3Q8IZD9 2030 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 MGAMO43451 1857 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 ANK1P16157 1881 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 URADA6NGE7 173 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 LIPT2A6NK58 231 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 SAC3D1A6NKF1 404 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 LACTBL1A8MY62 500 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 E7ENX8 843 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 CACNB4O00305 520 aaPredicted RBP5.14□□□□□ -1.59
SRP54-211ENST00000556445 SCAMP1O15126 338 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 RIPK2O43353 540 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 TNFSF14O43557 240 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 PSTPIP1O43586 416 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 PEX1O43933 1283 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 TSPAN1O60635 241 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 NOL3O60936 208 aaKnown RBP5.14□□□□□ -1.59
SRP54-211ENST00000556445 CABYRO75952 493 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 HEXIM1O94992 359 aaKnown RBP5.14□□□□□ -1.59
SRP54-211ENST00000556445 MATN4O95460 622 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 FGGP02679 453 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 EDN1P05305 212 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 ANXA6P08133 673 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 PDHA1P08559 390 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 KRT19P08727 400 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 CXCL8P10145 99 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 CYP2B6P20813 491 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 CYP3A5P20815 502 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 HOXC8P31273 242 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 CHRNA3P32297 505 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 PNPLA4P41247 253 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 FOLR3P41439 243 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 PSMC4P43686 418 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 KCNJ5P48544 419 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 PIK3CGP48736 1102 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 CRYBB1P53674 252 aaPredicted RBP5.14□□□□□ -1.59
SRP54-211ENST00000556445 GSCP56915 257 aaPredicted RBP5.14□□□□□ -1.59
SRP54-211ENST00000556445 TAP2Q03519 686 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 GABPB1Q06547 395 aaPredicted RBP5.14□□□□□ -1.59
SRP54-211ENST00000556445 TCF15Q12870 199 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 AIMP2Q13155 320 aaKnown RBP5.14□□□□□ -1.59
SRP54-211ENST00000556445 RPA4Q13156 261 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 PIGHQ14442 188 aaPredicted RBP5.14□□□□□ -1.59
SRP54-211ENST00000556445 ZNF268Q14587 947 aaPredicted RBP5.14□□□□□ -1.59
SRP54-211ENST00000556445 CASP8Q14790 479 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 MARCH8Q5T0T0 291 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 LRRC38Q5VT99 294 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 DCAF12L1Q5VU92 463 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 ALS2CLQ60I27 953 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 JADE1Q6IE81 842 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 PLEKHA7Q6IQ23 1121 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 KRT80Q6KB66 452 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 FBXO42Q6P3S6 717 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 MON1BQ7L1V2 547 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 LPCAT2Q7L5N7 544 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 UNC93AQ86WB7 457 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 ERICH1Q86X53 443 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 TUSC5Q8IXB3 177 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 FAM217AQ8IXS0 508 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 YAF2Q8IY57 180 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 ADGRF2Q8IZF7 708 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 LRRC52Q8N7C0 313 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 OR52K2Q8NGK3 314 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 POC1BQ8TC44 478 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 LRRC45Q96CN5 670 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 RBM41Q96IZ5 413 aaKnown RBP5.14□□□□□ -1.59
SRP54-211ENST00000556445 FER1L6-AS2Q96M78 137 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 ZNF560Q96MR9 790 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 RUFY1Q96T51 708 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 PSMB7Q99436 277 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 KRT12Q99456 494 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 MTG1Q9BT17 334 aaPredicted RBP5.14□□□□□ -1.59
SRP54-211ENST00000556445 LRRC1Q9BTT6 524 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 KLHL4Q9C0H6 718 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 TSPYL1Q9H0U9 437 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 UPF3AQ9H1J1 476 aaKnown RBP5.14□□□□□ -1.59
SRP54-211ENST00000556445 MINDY3Q9H8M7 445 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 SETD4Q9NVD3 440 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 MRPS18AQ9NVS2 196 aaKnown RBP5.14□□□□□ -1.59
SRP54-211ENST00000556445 DPP3Q9NY33 737 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 ETAA1Q9NY74 926 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 CFAP97Q9P2B7 532 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 LRIT1Q9P2V4 623 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 ANAPC7Q9UJX3 599 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 TLK1Q9UKI8 766 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 ABT1Q9ULW3 272 aaKnown RBP5.14□□□□□ -1.59
SRP54-211ENST00000556445 UBQLN1Q9UMX0 589 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms