RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 CARD6Q9BX69 1037 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 TRIM31Q9BZY9 425 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 WWP1Q9H0M0 922 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 COG4Q9H9E3 785 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 IL1RAPL1Q9NZN1 696 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 OGFRQ9NZT2 677 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 SAMD15Q9P1V8 674 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 WHRNQ9P202 907 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 PDP2Q9P2J9 529 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 ATXN7L1Q9ULK2 861 aaPredicted RBP9.44□□□□□ -0.9
SRP54-210ENST00000556380 PCDHB1Q9Y5F3 818 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 ENTPD2Q9Y5L3 495 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 MAD1L1Q9Y6D9 718 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 TEX264Q9Y6I9 313 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 LAMA5O15230 3695 aa9.44□□□□□ -0.9
SRP54-210ENST00000556380 AHCTF1Q8WYP5 2266 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 LILRA5A6NI73 299 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 QSOX1O00391 747 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 GPC4O75487 556 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 CPNE6O95741 557 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 TTC4O95801 387 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 VIPP01282 170 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 POLBP06746 335 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 OR56A5P0C7T3 313 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 MTHFD1P11586 935 aaKnown RBP9.43□□□□□ -0.9
SRP54-210ENST00000556380 PGAM1P18669 254 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 PAMP19021 973 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 RPS3P23396 243 aaKnown RBP eCLIP9.43□□□□□ -0.98e-6■■□□□ 12.6
SRP54-210ENST00000556380 ACADLP28330 430 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 CCR7P32248 378 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 CSF2RBP32927 897 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 PPARGP37231 505 aaPredicted RBP9.43□□□□□ -0.9
SRP54-210ENST00000556380 ELK3P41970 407 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 EPHA4P54764 986 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 GPLD1P80108 840 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 CKAP4Q07065 602 aaKnown RBP9.43□□□□□ -0.9
SRP54-210ENST00000556380 SPIDRQ14159 915 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 CRYMQ14894 314 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 RTP5Q14D33 572 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 ZNF789Q5FWF6 425 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 STEAP4Q687X5 459 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 TMEM26Q6ZUK4 368 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 USP53Q70EK8 1073 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 SDCCAG8Q86SQ7 713 aaPredicted RBP9.43□□□□□ -0.9
SRP54-210ENST00000556380 LRRC6Q86X45 466 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 SLITRK4Q8IW52 837 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 RBM12BQ8IXT5 1001 aaKnown RBP9.43□□□□□ -0.9
SRP54-210ENST00000556380 UNC5BQ8IZJ1 945 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 PDIK1LQ8N165 341 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 MMGT1Q8N4V1 131 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 NOA1Q8NC60 698 aaKnown RBP9.43□□□□□ -0.9
SRP54-210ENST00000556380 BBOF1Q8ND07 529 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 LKAAEAR1Q8TD35 194 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 ZNF592Q92610 1267 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 ART4Q93070 314 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 SH3KBP1Q96B97 665 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 LRRC39Q96DD0 335 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 DEPDC7Q96QD5 511 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 GFM1Q96RP9 751 aaKnown RBP9.43□□□□□ -0.9
SRP54-210ENST00000556380 SLC38A3Q99624 504 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 NUDT22Q9BRQ3 303 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 NAT9Q9BTE0 207 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 TBC1D10AQ9BXI6 508 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 VPS37BQ9H9H4 285 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 EPB41L5Q9HCM4 733 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 POT1Q9NUX5 634 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 KCNK4Q9NYG8 393 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 PSMD13Q9UNM6 376 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 CDYLQ9Y232 598 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 WDFY3Q8IZQ1 3526 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 PIKFYVEQ9Y2I7 2098 aa9.43□□□□□ -0.9
SRP54-210ENST00000556380 IQCF5A8MTL0 148 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 C1QTNF9BB2RNN3 333 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 LIN7AO14910 233 aaPredicted RBP9.42□□□□□ -0.9
SRP54-210ENST00000556380 NDUFS3O75489 264 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 FTH1P02794 183 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 C1QTNF9P0C862 333 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 OGNP20774 298 aaKnown RBP9.42□□□□□ -0.9
SRP54-210ENST00000556380 AOAHP28039 575 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 CCKBRP32239 447 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 HALP42357 657 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 PREPP48147 710 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 CD151P48509 253 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 ARL4CP56559 192 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 PLOD1Q02809 727 aaPredicted RBP9.42□□□□□ -0.9
SRP54-210ENST00000556380 BIRC2Q13490 618 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 GPR18Q14330 331 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 FRG1Q14331 258 aaKnown RBP9.42□□□□□ -0.9
SRP54-210ENST00000556380 HIF1AQ16665 826 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 LONRF1Q17RB8 773 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 AMZ1Q400G9 498 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 HSP90AA5PQ58FG0 334 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 SPANXN3Q5MJ09 141 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 CTSL3PQ5NE16 218 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 RNF187Q5TA31 235 aaPredicted RBP9.42□□□□□ -0.9
SRP54-210ENST00000556380 ZNF549Q6P9A3 640 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 WDR74Q6RFH5 385 aaPredicted RBP9.42□□□□□ -0.9
SRP54-210ENST00000556380 ZDHHC24Q6UX98 284 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 NAPRTQ6XQN6 538 aa9.42□□□□□ -0.9
SRP54-210ENST00000556380 UNC5AQ6ZN44 842 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms