RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 SLAMF9Q96A28 289 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 EXOC4Q96A65 974 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 COQ8BQ96D53 544 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 SPDL1Q96EA4 605 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 CFAP36Q96G28 342 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 CABS1Q96KC9 395 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 PRMT6Q96LA8 375 aaPredicted RBP2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 FAM81BQ96LP2 452 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 INPP5KQ9BT40 448 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 SPRY4Q9C004 299 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 PCED1AQ9H1Q7 454 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 VPS33BQ9H267 617 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 R3HDMLQ9H3Y0 253 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 FZD8Q9H461 694 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 IL1RAPL2Q9NP60 686 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 NRIP3Q9NQ35 241 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 ADARB2Q9NS39 739 aaKnown RBP2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 ABCB8Q9NUT2 735 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 DPP3Q9NY33 737 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 TUBA8Q9NY65 449 aaPredicted RBP2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 ERAP1Q9NZ08 941 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 RCC2Q9P258 522 aaKnown RBP2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 CACNG4Q9UBN1 327 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 BLOC1S6Q9UL45 172 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 GRIP1Q9Y3R0 1128 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 NME7Q9Y5B8 376 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 N6AMT1Q9Y5N5 214 aa2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 BRD4O60885 1362 aaPredicted RBP2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 DHX29Q7Z478 1369 aaKnown RBP2.94□□□□□ -1.94
MTHFD1-212ENST00000555858 ARHGEF17Q96PE2 2063 aaPredicted RBP2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 SYNJ2BP-COX16A0A087WUM0 186 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 HEPACAM2A8MVW5 462 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 M0QX08 132 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 CLDN4O14493 209 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 PTGESO14684 152 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 TO15178 435 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 ASAP2O43150 1006 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 DDNO94850 711 aaPredicted RBP2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 VIMP08670 466 aaKnown RBP2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 RAB40ALP0C0E4 278 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 DESP17661 470 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 CD9P21926 228 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 PTPN3P26045 913 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 GNL1P36915 607 aaPredicted RBP2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 CRKLP46109 303 aaKnown RBP2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 ASCL1P50553 236 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 CLCNKAP51800 687 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 GTF2A1P52655 376 aaPredicted RBP2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 NUDT6P53370 316 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 CLDN20P56880 219 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 PPATQ06203 517 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 SRSF1Q07955 248 aaKnown RBP eCLIP2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 C17orf67Q0P5P2 114 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 ITGA7Q13683 1181 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 RCN2Q14257 317 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 HNF4GQ14541 408 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 PTGR1Q14914 329 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 TRIP6Q15654 476 aaKnown RBP2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 AMZ1Q400G9 498 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 Q4G0T1 1027 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 FSCBQ5H9T9 825 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 KCNT1Q5JUK3 1230 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 TYW3Q6IPR3 259 aaKnown RBP2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 ALKBH5Q6P6C2 394 aaKnown RBP2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 GBP6Q6ZN66 633 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 Q6ZTK2 550 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 ATG9AQ7Z3C6 839 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 RD3Q7Z3Z2 195 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 CTU1Q7Z7A3 348 aaKnown RBP2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 TLK2Q86UE8 772 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 GPR180Q86V85 440 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 DZIP1Q86YF9 867 aaKnown RBP2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 EFCAB13Q8IY85 973 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 KRT222Q8N1A0 295 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 SLC5A8Q8N695 610 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 ARFGAP1Q8N6T3 406 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 NHLRC2Q8NBF2 726 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 DRAXINQ8NBI3 349 aaPredicted RBP2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 OR2AK2Q8NG84 335 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 OR2AJ1Q8NGZ0 328 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 FAM76AQ8TAV0 307 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 KIAA1524Q8TCG1 905 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 MAGEC3Q8TD91 643 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 OIT3Q8WWZ8 545 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 ZNF75CPQ92670 426 aaPredicted RBP2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 KRT35Q92764 455 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 MUS81Q96NY9 551 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 SLC39A3Q9BRY0 314 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 C16orf70Q9BSU1 422 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 KATNB1Q9BVA0 655 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 ACAT2Q9BWD1 397 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 RIOX1Q9H6W3 641 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 TBC1D17Q9HA65 648 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 HHATLQ9HCP6 504 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 POLLQ9UGP5 575 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 PADI3Q9ULW8 664 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 LOXL2Q9Y4K0 774 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 NFS1Q9Y697 457 aa2.93□□□□□ -1.94
MTHFD1-212ENST00000555858 ATAD2BQ9ULI0 1458 aa2.92□□□□□ -1.94
MTHFD1-212ENST00000555858 A0A1W2PPQ1 181 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms