RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 MICALCLQ6ZW33 695 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 PDZD3Q86UT5 571 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 EXOC3L1Q86VI1 746 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 SLC22A15Q8IZD6 547 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 ANKRD42Q8N9B4 389 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 BANPQ8N9N5 519 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 PHC3Q8NDX5 983 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 PPP1R14CQ8TAE6 165 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 STAG3L4Q8TBR4 150 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 LKAAEAR1Q8TD35 194 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 KCTD4Q8WVF5 259 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 OR1E3Q8WZA6 343 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 EXT2Q93063 718 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 TSACCQ96A04 125 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-220ENST00000555634 ARL8AQ96BM9 186 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 SCARF2Q96GP6 870 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-220ENST00000555634 PDLIM5Q96HC4 596 aaKnown RBP10.98□□□□□ -0.65
SHMT2-220ENST00000555634 MRPL57Q9BQC6 102 aaKnown RBP10.98□□□□□ -0.65
SHMT2-220ENST00000555634 ORAI3Q9BRQ5 295 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 ERVMER34-1Q9H9K5 563 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 MRPL40Q9NQ50 206 aaKnown RBP10.98□□□□□ -0.65
SHMT2-220ENST00000555634 RUVBL2Q9Y230 463 aaKnown RBP10.98□□□□□ -0.65
SHMT2-220ENST00000555634 KCNK6Q9Y257 313 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 PRKAB1Q9Y478 270 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 A0A1B0GVT2 93 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 A0A1W2PR77 199 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 NPEPPSL1A6NEC2 478 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 NEMP2A6NFY4 417 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 ZNF839A8K0R7 811 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 SLC16A5O15375 505 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 ZBTB14O43829 449 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 KERAO60938 352 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 LILRB5O75023 590 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 H2AFYO75367 372 aaKnown RBP10.97□□□□□ -0.65
SHMT2-220ENST00000555634 SLCO2B1O94956 709 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 EPN2O95208 641 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 CSF2P04141 144 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 ALPPL2P10696 532 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 MYL2P10916 166 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 GFAPP14136 432 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 TFEBP19484 476 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 NDUFS1P28331 727 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 CA5AP35218 305 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 PREPP48147 710 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 CSNK1EP49674 416 aaKnown RBP10.97□□□□□ -0.65
SHMT2-220ENST00000555634 CLCNKAP51800 687 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 SLC18A1P54219 525 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 IRF9Q00978 393 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 IL9RQ01113 521 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 NFE2L1Q14494 772 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 ACSBG2Q5FVE4 666 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 PRRT3Q5FWE3 981 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 TNFAIP8L3Q5GJ75 292 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 N4BP2L1Q5TBK1 243 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-220ENST00000555634 SLC30A9Q6PML9 568 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 LVRNQ6Q4G3 990 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 UBE2R2Q712K3 238 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-220ENST00000555634 TAF8Q7Z7C8 310 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 SLC22A9Q8IVM8 553 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 ZNF547Q8IVP9 402 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 TRIM42Q8IWZ5 723 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 TCAIMQ8N3R3 496 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 PNPLA1Q8N8W4 532 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 GIMAP7Q8NHV1 300 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 RHEBL1Q8TAI7 183 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 MCOLN3Q8TDD5 553 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 EEF1AKMT1Q8WVE0 214 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 CXorf40BQ96DE9 158 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 CCDC97Q96F63 343 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-220ENST00000555634 EGFL8Q99944 293 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 PAIP2Q9BPZ3 127 aaKnown RBP10.97□□□□□ -0.65
SHMT2-220ENST00000555634 RAB11FIP5Q9BXF6 653 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 KCNH6Q9H252 994 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 TRIT1Q9H3H1 467 aaKnown RBP10.97□□□□□ -0.65
SHMT2-220ENST00000555634 TFB2MQ9H5Q4 396 aaKnown RBP10.97□□□□□ -0.65
SHMT2-220ENST00000555634 ALG9Q9H6U8 611 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 EVA1BQ9NVM1 165 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 NUDT4Q9NZJ9 180 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 XPR1Q9UBH6 696 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 ASF1AQ9Y294 204 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 COLEC10Q9Y6Z7 277 aa10.97□□□□□ -0.65
SHMT2-220ENST00000555634 SLC5A10A0PJK1 596 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 OR5K4A6NMS3 321 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 SGTAO43765 313 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 ANXA6P08133 673 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 TPBGLP0DKB5 382 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 CD1DP15813 335 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 MPLP40238 635 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 CCT8P50990 548 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 PRKAA2P54646 552 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 AP1S2P56377 157 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 NAA20P61599 178 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 CTBSQ01459 385 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 TRIM61Q5EBN2 209 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 PPM1JQ5JR12 505 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 PEAR1Q5VY43 1037 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-220ENST00000555634 METRNLQ641Q3 311 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 LAYNQ6UX15 382 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 KDM7AQ6ZMT4 941 aa10.96□□□□□ -0.65
SHMT2-220ENST00000555634 PIWIL4Q7Z3Z4 852 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms