RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 DCAKDQ8WVC6 231 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 GLMNQ92990 594 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 PDLIM5Q96HC4 596 aaKnown RBP12.41□□□□□ -0.42
SYNE2-219ENST00000555323 PAFAH2Q99487 392 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 GPR21Q99679 349 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 SLC30A3Q99726 388 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 OLFM1Q99784 485 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 OSGEPL1Q9H4B0 414 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 POPDC3Q9HBV1 291 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 SLC24A2Q9UI40 661 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 U3KQA8 63 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 ASCC3Q8N3C0 2202 aaKnown RBP12.4□□□□□ -0.42
SYNE2-219ENST00000555323 EME2A4GXA9 379 aaPredicted RBP12.4□□□□□ -0.42
SYNE2-219ENST00000555323 PDZK1P1A8MUH7 402 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 POC1B-GALNT4F8VUJ3 575 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 SLC30A4O14863 429 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 NUDT21O43809 227 aaKnown RBP12.4□□□□□ -0.42
SYNE2-219ENST00000555323 SNX2O60749 519 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 ERLIN1O75477 346 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 MATN4O95460 622 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 SHBGP04278 402 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 CKMT1AP12532 417 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 ENO3P13929 434 aaPredicted RBP12.4□□□□□ -0.42
SYNE2-219ENST00000555323 PNLIPP16233 465 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 GLB1P16278 677 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 CSRP1P21291 193 aaKnown RBP12.4□□□□□ -0.42
SYNE2-219ENST00000555323 HALP42357 657 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 PREPP48147 710 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 RPIAP49247 311 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 UBE2IP63279 158 aaKnown RBP12.4□□□□□ -0.42
SYNE2-219ENST00000555323 BOP1Q14137 746 aaKnown RBP12.4□□□□□ -0.42
SYNE2-219ENST00000555323 TMED2Q15363 201 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 RPE65Q16518 533 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 TTLL9Q3SXZ7 439 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 C14orf28Q4W4Y0 310 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 LGSNQ5TDP6 509 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 PAQR3Q6TCH7 311 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 GLRX5Q86SX6 157 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 PDZD3Q86UT5 571 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 TDRPQ86YL5 185 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 RASGRP3Q8IV61 690 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 VRK3Q8IV63 474 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 SFTPA2Q8IWL1 248 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 IQCKQ8N0W5 287 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 ARL14Q8N4G2 192 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 SIDT2Q8NBJ9 832 aaKnown RBP12.4□□□□□ -0.42
SYNE2-219ENST00000555323 SPDYE1Q8NFV5 336 aaPredicted RBP12.4□□□□□ -0.42
SYNE2-219ENST00000555323 OR6C4Q8NGE1 309 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 SETD7Q8WTS6 366 aaKnown RBP12.4□□□□□ -0.42
SYNE2-219ENST00000555323 ZFPM2Q8WW38 1151 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 ISL2Q96A47 359 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 ATXN7L3BQ96GX2 97 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 ELMO2Q96JJ3 720 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 RMDN2Q96LZ7 410 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 INSM2Q96T92 566 aaPredicted RBP12.4□□□□□ -0.42
SYNE2-219ENST00000555323 CDC6Q99741 560 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 WWP1Q9H0M0 922 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 SYTL2Q9HCH5 934 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 SARS2Q9NP81 518 aaKnown RBP12.4□□□□□ -0.42
SYNE2-219ENST00000555323 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.4□□□□□ -0.42
SYNE2-219ENST00000555323 TRMT6Q9UJA5 497 aaKnown RBP12.4□□□□□ -0.42
SYNE2-219ENST00000555323 IKBKGQ9Y6K9 419 aa12.4□□□□□ -0.42
SYNE2-219ENST00000555323 ARHGEF17Q96PE2 2063 aaPredicted RBP12.39□□□□□ -0.43
SYNE2-219ENST00000555323 KRT38O76015 456 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 LDOC1O95751 146 aaPredicted RBP12.39□□□□□ -0.43
SYNE2-219ENST00000555323 SLC35G4P0C7Q5 338 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 MPC1LP0DKB6 136 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 CKMT2P17540 419 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 SDHBP21912 280 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 ACP1P24666 158 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 DUSP3P51452 185 aaPredicted RBP12.39□□□□□ -0.43
SYNE2-219ENST00000555323 DNAJC3Q13217 504 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 USP10Q14694 798 aaKnown RBP12.39□□□□□ -0.43
SYNE2-219ENST00000555323 NR1D2Q14995 579 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 NR0B2Q15466 257 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 SYTL3Q4VX76 610 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 ACSBG2Q5FVE4 666 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.39□□□□□ -0.43
SYNE2-219ENST00000555323 LRRC8EQ6NSJ5 796 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 TMEM207Q6UWW9 146 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 TIFABQ6ZNK6 161 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 SLC9B2Q86UD5 537 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 ALYREFQ86V81 257 aaKnown RBP12.39□□□□□ -0.43
SYNE2-219ENST00000555323 CEP97Q8IW35 865 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 MAPK15Q8TD08 544 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 SLC37A2Q8TED4 501 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 PATE1Q8WXA2 126 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 ANKRD7Q92527 254 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 TFGQ92734 400 aaPredicted RBP12.39□□□□□ -0.43
SYNE2-219ENST00000555323 FAM136AQ96C01 138 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 MRRFQ96E11 262 aaKnown RBP12.39□□□□□ -0.43
SYNE2-219ENST00000555323 TSPAN17Q96FV3 270 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 CAMK1GQ96NX5 476 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 TMEM109Q9BVC6 243 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 ROPN1BQ9BZX4 212 aaPredicted RBP12.39□□□□□ -0.43
SYNE2-219ENST00000555323 UCK1Q9HA47 277 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 ROPN1Q9HAT0 212 aaPredicted RBP12.39□□□□□ -0.43
SYNE2-219ENST00000555323 SLC40A1Q9NP59 571 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 POT1Q9NUX5 634 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 EURLQ9NYK6 297 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms