RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 CTGFP29279 349 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 UGT2B10P36537 528 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 OR1G1P47890 313 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 ERVK-8P63133 956 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 SMARCB1Q12824 385 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 SERINC3Q13530 473 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 TIGD2Q4W5G0 525 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 ALFQ53S48 1182 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 PAGE2BQ5JRK9 111 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 PAGE3Q5JUK9 113 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 MRNIPQ6NTE8 343 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 FBXL22Q6P050 247 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 ZFAND4Q86XD8 727 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 CHCHD4Q8N4Q1 142 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 OR5K1Q8NHB7 308 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 FBXO32Q969P5 355 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 PSMG2Q969U7 264 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 ZNF486Q96H40 463 aaPredicted RBP10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 MMP27Q9H306 513 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 MAGIXQ9H6Y5 334 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 POLR3BQ9NW08 1133 aaPredicted RBP10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 SMPD4Q9NXE4 827 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 MARCH2Q9P0N8 246 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 UXTQ9UBK9 157 aaPredicted RBP10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 INTS6Q9UL03 887 aaKnown RBP10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 ORC6Q9Y5N6 252 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 MYO16Q9Y6X6 1858 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 SYCE1LA8MT33 242 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 F8W810 466 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 AURKAO14965 403 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 LDB2O43679 373 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 RFPL2O75678 378 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 CNTN5O94779 1100 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 INMTO95050 263 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 PARNO95453 639 aaKnown RBP10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 KRT75O95678 551 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 TCF3P15923 654 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 ALDH7A1P49419 539 aaKnown RBP10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 ST13P50502 369 aaKnown RBP10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 OR4D2P58180 307 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 ARPC4P59998 168 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 MAXP61244 160 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 EMX1Q04741 257 aaPredicted RBP10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 CACNB2Q08289 660 aaPredicted RBP10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 PRKG2Q13237 762 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 KCNAB2Q13303 367 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 DNASE1L3Q13609 305 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 MEP1AQ16819 746 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 IMPG1Q17R60 797 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 CTU2Q2VPK5 515 aaKnown RBP10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 PGS1Q32NB8 556 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 ADPRMQ3LIE5 342 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 PLA2G4EQ3MJ16 856 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 CTXN3Q4LDR2 81 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 ZNF789Q5FWF6 425 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 VARS2Q5ST30 1063 aaKnown RBP10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 GPR158Q5T848 1215 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 ZNF280DQ6N043 979 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 ZNF280BQ86YH2 543 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 ADHFE1Q8IWW8 467 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 SLC7A5P1Q8MH63 180 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 EID3Q8N140 333 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 GLMNQ92990 594 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 VPS33AQ96AX1 596 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 TBC1D20Q96BZ9 403 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 SPATA17Q96L03 361 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 KLHL5Q96PQ7 755 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 AMBRA1Q9C0C7 1298 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 OR2B2Q9GZK3 357 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 DSN1Q9H410 356 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 POU2F3Q9UKI9 436 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 NOX1Q9Y5S8 564 aa10.53□□□□□ -0.72
MTHFD1-210ENST00000555252 TBKBP1A7MCY6 615 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 STX16O14662 325 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 SNPHO15079 494 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 CA12O43570 354 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 SNX2O60749 519 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 PRAMEF11O60813 436 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 RPP40O75818 363 aaKnown RBP10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 PRKD3O94806 890 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 FKBP9O95302 570 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 UROSP10746 265 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 CES1P23141 567 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 FLT3LGP49771 235 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 CLCQ05315 142 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 MRPL58Q14197 206 aaKnown RBP10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 ZNF235Q14590 738 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 SF3B4Q15427 424 aaKnown RBP eCLIP10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 PLEKHG6Q3KR16 790 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 CLLU1OSQ5K130 101 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 RAP1GAP2Q684P5 730 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 ANKS6Q68DC2 871 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 LAIR2Q6ISS4 152 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 NECAB2Q7Z6G3 386 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 HIPK1Q86Z02 1210 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 DCP2Q8IU60 420 aaKnown RBP10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 LYSMD2Q8IV50 215 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 DTWD1Q8N5C7 304 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 LILRB4Q8NHJ6 448 aa10.52□□□□□ -0.73
MTHFD1-210ENST00000555252 BRSK1Q8TDC3 778 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms