RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 SRSF1Q07955 248 aaKnown RBP eCLIP10.36□□□□□ -0.75
SHMT2-215ENST00000554656 FOXM1Q08050 763 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 IGFBP7Q16270 282 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 CRTC2Q53ET0 693 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-215ENST00000554656 TEX44Q53QW1 395 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 SIRPB2Q5JXA9 342 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 AGAP9Q5VTM2 703 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 WASH2PQ6VEQ5 465 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 FAM83HQ6ZRV2 1179 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-215ENST00000554656 PRSS42Q7Z5A4 293 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 TMEM135Q86UB9 458 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 TRIM48Q8IWZ4 208 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 ESX1Q8N693 406 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 C9orf43Q8TAL5 461 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-215ENST00000554656 KLHL6Q8WZ60 621 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 ABHD17AQ96GS6 310 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 OXNAD1Q96HP4 312 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-215ENST00000554656 ELMO2Q96JJ3 720 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 TEKT5Q96M29 485 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 QKIQ96PU8 341 aaKnown RBP eCLIP10.36□□□□□ -0.75
SHMT2-215ENST00000554656 OR6C1Q96RD1 312 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 DPH5Q9H2P9 285 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 TRIT1Q9H3H1 467 aaKnown RBP10.36□□□□□ -0.75
SHMT2-215ENST00000554656 IL26Q9NPH9 171 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 WASH6PQ9NQA3 447 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 RAD18Q9NS91 495 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 POT1Q9NUX5 634 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 ZNF446Q9NWS9 450 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 SNX24Q9Y343 169 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 USP9YO00507 2555 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-215ENST00000554656 IGHV5-51A0A0C4DH38 117 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 LOC285095A0A1B0GVY8 99 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 H7C0C1 242 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 MTSS1O43312 755 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 BUD23O43709 281 aaKnown RBP10.35□□□□□ -0.75
SHMT2-215ENST00000554656 UGT1A9O60656 530 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 AMD1P17707 334 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 UGT1A6P19224 532 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 TCN2P20062 427 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 UGT1A1P22309 533 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 UGT1A4P22310 534 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 HMGCLP35914 325 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 DLSTP36957 453 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 CASRP41180 1078 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 ATP5OP48047 213 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 FOXK1P85037 733 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 TMEM115Q12893 351 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-215ENST00000554656 CBLBQ13191 982 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 CASP8Q14790 479 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 SLMAPQ14BN4 828 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 MORF4L2Q15014 288 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 CHRNA6Q15825 494 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 P3H1Q32P28 736 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 CACHD1Q5VU97 1274 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 C16orf46Q6P387 395 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 DARS2Q6PI48 645 aaKnown RBP10.35□□□□□ -0.75
SHMT2-215ENST00000554656 ZDHHC24Q6UX98 284 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 C6orf15Q6UXA7 325 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-215ENST00000554656 CERS6Q6ZMG9 384 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 FAM92BQ6ZTR7 304 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 HOOK3Q86VS8 718 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 TRAPPC5Q8IUR0 188 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 RASGEF1AQ8N9B8 481 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 FBXO25Q8TCJ0 367 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 APOBEC4Q8WW27 367 aaKnown RBP10.35□□□□□ -0.75
SHMT2-215ENST00000554656 MRGPRX2Q96LB1 330 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 RUFY1Q96T51 708 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 TMEM121Q9BTD3 319 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 EFHD1Q9BUP0 239 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 UGT1A7Q9HAW7 530 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 UGT1A10Q9HAW8 530 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 UGT1A8Q9HAW9 530 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 IL17CQ9P0M4 197 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 SEMA5BQ9P283 1151 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 PAK5Q9P286 719 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 EPHA6Q9UF33 1036 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 TP53TG5Q9Y2B4 290 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 KCNMB2Q9Y691 235 aa10.35□□□□□ -0.75
SHMT2-215ENST00000554656 UTP20O75691 2785 aaKnown RBP10.34□□□□□ -0.75
SHMT2-215ENST00000554656 FER1L5A0AVI2 2057 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 PIKFYVEQ9Y2I7 2098 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 CLEC18AA5D8T8 446 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 TOX3O15405 576 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-215ENST00000554656 SPAG6O75602 509 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 RASSF9O75901 435 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 STK10O94804 968 aaKnown RBP10.34□□□□□ -0.75
SHMT2-215ENST00000554656 FGF5P12034 268 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 NELFEP18615 380 aaKnown RBP10.34□□□□□ -0.75
SHMT2-215ENST00000554656 IDSP22304 550 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 TNNT3P45378 269 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-215ENST00000554656 PLTPP55058 493 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 DMPKQ09013 629 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 GPS2Q13227 327 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 IL11RAQ14626 422 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 KCNAB1Q14722 419 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 PTPRCAPQ14761 206 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 TRADDQ15628 312 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 RPE65Q16518 533 aa10.34□□□□□ -0.75
SHMT2-215ENST00000554656 LACTB2Q53H82 288 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-215ENST00000554656 IRGCQ6NXR0 463 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms