RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 TOMM20Q15388 145 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 GLIPR1L2Q4G1C9 344 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 ATG16L1Q676U5 607 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 KCTD16Q68DU8 428 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 DGAT2L7PQ6IED9 249 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 VSTM1Q6UX27 236 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 KDM7AQ6ZMT4 941 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 BZW1Q7L1Q6 419 aaKnown RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 PRUNE1Q86TP1 453 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 CIR1Q86X95 450 aaPredicted RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 FAM131BQ86XD5 332 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 SPATA2LQ8IUW3 424 aaPredicted RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 DCP1BQ8IZD4 617 aaKnown RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 ARFGAP2Q8N6H7 521 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 POU5F2Q8N7G0 328 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 FAM71DQ8N9W8 422 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 SLC22A17Q8WUG5 538 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 NDRG1Q92597 394 aaKnown RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 PRCCQ92733 491 aaPredicted RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 TTC25Q96NG3 672 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 TOX2Q96NM4 488 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 CASD1Q96PB1 797 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 MRPL9Q9BYD2 267 aaKnown RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 ACTRT3Q9BYD9 372 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 PAIP1Q9H074 479 aaKnown RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 HIPK3Q9H422 1215 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 ZNF768Q9H5H4 540 aaKnown RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 USP29Q9HBJ7 922 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 NOD2Q9HC29 1040 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 WDR6Q9NNW5 1121 aaKnown RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 PIGVQ9NUD9 493 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 TMEM51Q9NW97 253 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 ADAM28Q9UKQ2 775 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 NAALADL1Q9UQQ1 740 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 HEY1Q9Y5J3 304 aa4.76□□□□□ -1.65
PPP4R3A-204ENST00000554574 LAMA2P24043 3122 aaKnown RBP4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 GXYLT2A0PJZ3 443 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 OR6C75A6NL08 312 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 HACD1B0YJ81 288 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 E7ESA3 106 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 H7C0C1 242 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 RASGRF2O14827 1237 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 TRIM24O15164 1050 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 EIF3HO15372 352 aaKnown RBP eCLIP4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 TADA2AO75478 443 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 ZNF189O75820 626 aaPredicted RBP4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 NCR1O76036 304 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 WDR47O94967 919 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 ACSL3O95573 720 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 PLATP00750 562 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 IGLV3-25P01717 112 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 ABHD2P08910 425 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 GOT1P17174 413 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 DRD1P21728 446 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 MAGEA4P43358 317 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 MAGEA6P43360 314 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 MAGEA11P43364 429 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 ATP5OP48047 213 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 HCAR3P49019 387 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 LMAN1P49257 510 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 CXCR3P49682 368 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 FAM3BP58499 235 aaPredicted RBP4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 SMARCB1Q12824 385 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 ELAVL2Q12926 359 aaKnown RBP4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 SEMA3BQ13214 749 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 NME3Q13232 169 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 DPYSQ14117 519 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 KYNUQ16719 465 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 SLC39A12Q504Y0 691 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 SLC45A4Q5BKX6 768 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 TNFAIP8L3Q5GJ75 292 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 BSPRYQ5W0U4 402 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 NCBP2-AS2Q69YL0 99 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 SLC39A5Q6ZMH5 540 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 CENPUQ71F23 418 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 CDKL3Q8IVW4 592 aaPredicted RBP4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 PYROXD2Q8N2H3 581 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 NAT8LQ8N9F0 302 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 RNF139Q8WU17 664 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 UCMAQ8WVF2 138 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 TLCD1Q96CP7 247 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 SERPINB12Q96P63 405 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 OLFM3Q96PB7 478 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 FRMD8Q9BZ67 464 aaPredicted RBP4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 STMN4Q9H169 189 aaPredicted RBP4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 CENPHQ9H3R5 247 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 RMI1Q9H9A7 625 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 PREBQ9HCU5 417 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 ABCC13Q9NSE7 274 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 IRAK4Q9NWZ3 460 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 DDIT4Q9NX09 232 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 NINJ2Q9NZG7 142 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 PAK5Q9P286 719 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 AASSQ9UDR5 926 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 FBXW11Q9UKB1 542 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 PRG3Q9Y2Y8 225 aaPredicted RBP4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 ANKRD36A6QL64 1941 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 ALPK3Q96L96 1907 aa4.75□□□□□ -1.65
PPP4R3A-204ENST00000554574 A6NCN8 305 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms