RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 SUN2Q9UH99 717 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 ANAPC5Q9UJX4 755 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 SARDHQ9UL12 918 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 MMP17Q9ULZ9 603 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 CHKBQ9Y259 395 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 MRPS17Q9Y2R5 130 aaKnown RBP6.3□□□□□ -1.4
SCFD1-212ENST00000554486 AAR2Q9Y312 384 aaKnown RBP6.3□□□□□ -1.4
SCFD1-212ENST00000554486 RAI2Q9Y5P3 530 aa6.3□□□□□ -1.4
SCFD1-212ENST00000554486 LOC285095A0A1B0GVY8 99 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 E7EVH7 732 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 ALOX15BO15296 676 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 PSMD3O43242 534 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 CTIFO43310 598 aaKnown RBP6.29□□□□□ -1.4
SCFD1-212ENST00000554486 DCXO43602 365 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 SOCS5O75159 536 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 USP12O75317 370 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 TOX4O94842 621 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 PGLSO95336 258 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 NDST3O95803 873 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 EPOP01588 193 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 UGT2B4P06133 528 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 PDHA1P08559 390 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 ATXN1LP0C7T5 689 aaKnown RBP6.29□□□□□ -1.4
SCFD1-212ENST00000554486 HOXB2P14652 356 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 XPAP23025 273 aaPredicted RBP6.29□□□□□ -1.4
SCFD1-212ENST00000554486 ECHS1P30084 290 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 KIR2DL3P43628 341 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 COPAP53621 1224 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 NRG3P56975 720 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 PPP2CBP62714 309 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 VSNL1P62760 191 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 PPP2CAP67775 309 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 CDK16Q00536 496 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 RAD51Q06609 339 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 CDK18Q07002 472 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 BCL2L1Q07817 233 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 SIGLEC14Q08ET2 396 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 ELAVL3Q14576 367 aaKnown RBP6.29□□□□□ -1.4
SCFD1-212ENST00000554486 GRM3Q14832 879 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 MORF4L2Q15014 288 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 LRRK1Q38SD2 2015 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 POM121L1PQ3SYA9 428 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 CCDC70Q6NSX1 233 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 RANBP10Q6VN20 620 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 Q6ZVL8 140 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 ZNF534Q76KX8 674 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 TRMT11Q7Z4G4 463 aaKnown RBP6.29□□□□□ -1.4
SCFD1-212ENST00000554486 KDELC2Q7Z4H8 507 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 PCGF5Q86SE9 256 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 ADGRE4PQ86SQ3 457 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 CAND1Q86VP6 1230 aaKnown RBP6.29□□□□□ -1.4
SCFD1-212ENST00000554486 HOOK3Q86VS8 718 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 IFT20Q8IY31 132 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 MCUQ8NE86 351 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 TMIEQ8NEW7 156 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 IPMKQ8NFU5 416 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 MYRIPQ8NFW9 859 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 OR52K1Q8NGK4 314 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 OR2T3Q8NH03 318 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 FBXO25Q8TCJ0 367 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 OR8D1Q8WZ84 308 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 ARRDC3Q96B67 414 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 SLC7A6OSQ96CW6 309 aaPredicted RBP6.29□□□□□ -1.4
SCFD1-212ENST00000554486 ECHDC3Q96DC8 303 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 FEM1CQ96JP0 617 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 SMIM14Q96QK8 99 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 NELL2Q99435 816 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 TBL1YQ9BQ87 522 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 APOL2Q9BQE5 337 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 TDRD1Q9BXT4 1180 aaKnown RBP6.29□□□□□ -1.4
SCFD1-212ENST00000554486 RSPH9Q9H1X1 276 aaPredicted RBP6.29□□□□□ -1.4
SCFD1-212ENST00000554486 NEUROG2Q9H2A3 272 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 ZDHHC6Q9H6R6 413 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 ATP13A3Q9H7F0 1226 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 LRRC40Q9H9A6 602 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 ARNT2Q9HBZ2 717 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 CASS4Q9NQ75 786 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 FAM114A2Q9NRY5 505 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 ZIM2Q9NZV7 527 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 IL36AQ9UHA7 158 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 SHOC2Q9UQ13 582 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 DOCK9Q9BZ29 2069 aa6.29□□□□□ -1.4
SCFD1-212ENST00000554486 TSPAN11A1L157 253 aa6.28□□□□□ -1.4
SCFD1-212ENST00000554486 GOLGA6CA6NDK9 693 aa6.28□□□□□ -1.4
SCFD1-212ENST00000554486 GOLGA6BA6NDN3 693 aa6.28□□□□□ -1.4
SCFD1-212ENST00000554486 TMEM221A6NGB7 291 aa6.28□□□□□ -1.4
SCFD1-212ENST00000554486 ERI2A8K979 691 aaKnown RBP6.28□□□□□ -1.4
SCFD1-212ENST00000554486 GOLGA8MH3BSY2 632 aa6.28□□□□□ -1.4
SCFD1-212ENST00000554486 M0R296 226 aa6.28□□□□□ -1.4
SCFD1-212ENST00000554486 MID1O15344 667 aa6.28□□□□□ -1.4
SCFD1-212ENST00000554486 PI15O43692 258 aa6.28□□□□□ -1.4
SCFD1-212ENST00000554486 SYNCRIPO60506 623 aaKnown RBP6.28□□□□□ -1.4
SCFD1-212ENST00000554486 AVILO75366 819 aa6.28□□□□□ -1.4
SCFD1-212ENST00000554486 ALDH1A2O94788 518 aa6.28□□□□□ -1.4
SCFD1-212ENST00000554486 SNUPNO95149 360 aaKnown RBP6.28□□□□□ -1.4
SCFD1-212ENST00000554486 PRKCGP05129 697 aa6.28□□□□□ -1.4
SCFD1-212ENST00000554486 DCNP07585 359 aaKnown RBP6.28□□□□□ -1.4
SCFD1-212ENST00000554486 LTA4HP09960 611 aaKnown RBP6.28□□□□□ -1.4
SCFD1-212ENST00000554486 GOLGA6DP0CG33 693 aa6.28□□□□□ -1.4
SCFD1-212ENST00000554486 CCND1P24385 295 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms