RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 PAFAH1B3Q15102 231 aaKnown RBP5.88□□□□□ -1.47
VPS33B-203ENST00000554264 DCAF4L1Q3SXM0 396 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 SLC44A4Q53GD3 710 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 NAPEPLDQ6IQ20 393 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 ZYG11AQ6WRX3 759 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 SCARA5Q6ZMJ2 495 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 FRMD7Q6ZUT3 714 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 PIWIL4Q7Z3Z4 852 aaKnown RBP5.88□□□□□ -1.47
VPS33B-203ENST00000554264 MRPL10Q7Z7H8 261 aaKnown RBP5.88□□□□□ -1.47
VPS33B-203ENST00000554264 TMEM135Q86UB9 458 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 ZNF354CQ86Y25 554 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 C10orf107Q8IVU9 208 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 RNF149Q8NC42 400 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 NUDT10Q8NFP7 164 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 CXorf38Q8TB03 319 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 NELL1Q92832 810 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 FOXRED1Q96CU9 486 aaPredicted RBP5.88□□□□□ -1.47
VPS33B-203ENST00000554264 MFSD3Q96ES6 412 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 SGF29Q96ES7 293 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 NUDT11Q96G61 164 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 HPDLQ96IR7 371 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 VPS50Q96JG6 964 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 CLPTM1LQ96KA5 538 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 ZNF597Q96LX8 424 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 CYP2S1Q96SQ9 504 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 FDXACB1Q9BRP7 624 aaPredicted RBP5.88□□□□□ -1.47
VPS33B-203ENST00000554264 TRMOQ9BU70 441 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 TRIM62Q9BVG3 475 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 ELOVL4Q9GZR5 314 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 RBM38Q9H0Z9 239 aaKnown RBP5.88□□□□□ -1.47
VPS33B-203ENST00000554264 ZNF385DQ9H6B1 395 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 SMYD3Q9H7B4 428 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 COG4Q9H9E3 785 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 PLGRKTQ9HBL7 147 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 NMRAL1Q9HBL8 299 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 ZBTB26Q9HCK0 441 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 LTB4R2Q9NPC1 389 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 SMYD2Q9NRG4 433 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 SNX15Q9NRS6 342 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 TMEM45AQ9NWC5 275 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 OXSMQ9NWU1 459 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 UCKL1Q9NWZ5 548 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 GALNT8Q9NY28 637 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 NCKIPSDQ9NZQ3 722 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 H2AFY2Q9P0M6 372 aaPredicted RBP5.88□□□□□ -1.47
VPS33B-203ENST00000554264 TMEM9Q9P0T7 183 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.88□□□□□ -1.47
VPS33B-203ENST00000554264 FNIP2Q9P278 1114 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 CYTH4Q9UIA0 394 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 RIMS3Q9UJD0 308 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 TSPAN16Q9UKR8 245 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 SARDHQ9UL12 918 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 CDH7Q9ULB5 785 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 RAB23Q9ULC3 237 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 SLC8A2Q9UPR5 921 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 MYRFQ9Y2G1 1151 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 MRPS17Q9Y2R5 130 aaKnown RBP5.88□□□□□ -1.47
VPS33B-203ENST00000554264 PRG3Q9Y2Y8 225 aaPredicted RBP5.88□□□□□ -1.47
VPS33B-203ENST00000554264 AP4S1Q9Y587 144 aa5.88□□□□□ -1.47
VPS33B-203ENST00000554264 TPRP12270 2363 aaKnown RBP5.88□□□□□ -1.47
VPS33B-203ENST00000554264 PDCD11Q14690 1871 aaKnown RBP5.88□□□□□ -1.47
VPS33B-203ENST00000554264 FANCMQ8IYD8 2048 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 DMDP11532 3685 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 CEP250Q9BV73 2442 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 KMT2BQ9UMN6 2715 aaPredicted RBP5.87□□□□□ -1.47
VPS33B-203ENST00000554264 DMXL1Q9Y485 3027 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 A0A087WXM4 84 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 A0A087X1B8 175 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 A0A096LPK6 155 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 WDR27A2RRH5 827 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 CCDC160A6NGH7 325 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 EIF4E1BA6NMX2 242 aaKnown RBP5.87□□□□□ -1.47
VPS33B-203ENST00000554264 MEI4A8MW99 385 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 INO80B-WBP1J3KQ70 363 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 RNF103O00237 685 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 CYB561D2O14569 222 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 SLC30A4O14863 429 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 TGM5O43548 720 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 FOXD2O60548 495 aaPredicted RBP5.87□□□□□ -1.47
VPS33B-203ENST00000554264 NOL3O60936 208 aaKnown RBP5.87□□□□□ -1.47
VPS33B-203ENST00000554264 LRP3O75074 770 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 AVILO75366 819 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 DAB1O75553 588 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 KLHL18O94889 574 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 H6PDO95479 791 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 METTL18O95568 372 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 ESRRBO95718 433 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 AP2A1O95782 977 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 POMCP01189 267 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 ITGB3P05106 788 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 TFAP2AP05549 437 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 HNRNPA1P09651 372 aaKnown RBP eCLIP5.87□□□□□ -1.47
VPS33B-203ENST00000554264 ZNF12P17014 697 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 SLC7A1P30825 629 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 SDHAP31040 664 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 SLC26A3P40879 764 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 RANBP1P43487 201 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 OR1G1P47890 313 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 DNAJB13P59910 316 aa5.87□□□□□ -1.47
VPS33B-203ENST00000554264 RHDQ02161 417 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms