RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 GMNCA6NCL1 334 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 PABPN1LA6NDY0 278 aaKnown RBP7.49□□□□□ -1.21
TDP1-209ENST00000554180 STX16-NPEPL1H3BU86 382 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 CDC7O00311 574 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 STX16O14662 325 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 MAP3K13O43283 966 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 DLX3O60479 287 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 SNNO75324 88 aaPredicted RBP7.49□□□□□ -1.21
TDP1-209ENST00000554180 PSIP1O75475 530 aaKnown RBP7.49□□□□□ -1.21
TDP1-209ENST00000554180 RPN2P04844 631 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 FGF3P11487 239 aaPredicted RBP7.49□□□□□ -1.21
TDP1-209ENST00000554180 GFAPP14136 432 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 CYP2A7P20853 494 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 BGNP21810 368 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 KCNC1P48547 511 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 BLKP51451 505 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 ALDH18A1P54886 795 aaKnown RBP7.49□□□□□ -1.21
TDP1-209ENST00000554180 HERVK_113P63132 956 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 PPARDQ03181 441 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 GABPB1Q06547 395 aaPredicted RBP7.49□□□□□ -1.21
TDP1-209ENST00000554180 CHI3L2Q15782 390 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 ZNF528Q3MIS6 628 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 WDR45BQ5MNZ6 344 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 METRNLQ641Q3 311 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 SULT1C3Q6IMI6 304 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 TTC23LQ6PF05 361 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 XKR5Q6UX68 686 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 UNC5DQ6UXZ4 953 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 Q6ZSR6 202 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 LPCAT2Q7L5N7 544 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 RAB44Q7Z6P3 723 aaPredicted RBP7.49□□□□□ -1.21
TDP1-209ENST00000554180 PDZD3Q86UT5 571 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 PARGQ86W56 976 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 VRK3Q8IV63 474 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 KIRREL3Q8IZU9 778 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 TCAIMQ8N3R3 496 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 FBXO39Q8N4B4 442 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 FBXL6Q8N531 539 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 FRMD1Q8N878 549 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 MFSD2AQ8NA29 543 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 PDPRQ8NCN5 879 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 OR13H1Q8NG92 308 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 MCOLN3Q8TDD5 553 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 UBTD2Q8WUN7 234 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 SKA2Q8WVK7 121 aaPredicted RBP7.49□□□□□ -1.21
TDP1-209ENST00000554180 DNASE2BQ8WZ79 361 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 L3HYPDHQ96EM0 354 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 PDXPQ96GD0 296 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 HSPA12BQ96MM6 686 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 C7orf26Q96N11 449 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 C1QTNF3Q9BXJ4 246 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 ERVK-6Q9BXR3 956 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 TRIM54Q9BYV2 358 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 NSRP1Q9H0G5 558 aaKnown RBP7.49□□□□□ -1.21
TDP1-209ENST00000554180 OR52A5Q9H2C5 316 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 CARS2Q9HA77 564 aaKnown RBP7.49□□□□□ -1.21
TDP1-209ENST00000554180 PARVBQ9HBI1 364 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 THAP1Q9NVV9 213 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 TRNAU1APQ9NX07 287 aaKnown RBP7.49□□□□□ -1.21
TDP1-209ENST00000554180 ZNHIT2Q9UHR6 403 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 IKZF3Q9UKT9 509 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 SUFUQ9UMX1 484 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 TNPO3Q9Y5L0 923 aaKnown RBP7.49□□□□□ -1.21
TDP1-209ENST00000554180 CACNA1IQ9P0X4 2223 aa7.49□□□□□ -1.21
TDP1-209ENST00000554180 A0A1W2PR77 199 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 TCP11X1B4DZS4 312 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 SUPT3HB4E1H0 165 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 UBXN8O00124 270 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 IFRD1O00458 451 aaPredicted RBP7.48□□□□□ -1.21
TDP1-209ENST00000554180 FFAR2O15552 330 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 RRP9O43818 475 aaKnown RBP7.48□□□□□ -1.21
TDP1-209ENST00000554180 NPHS1O60500 1241 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 SNX2O60749 519 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 EDF1O60869 148 aaKnown RBP7.48□□□□□ -1.21
TDP1-209ENST00000554180 SUPT3HO75486 399 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 RASGRP1O95267 797 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 FAM107AO95990 144 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 CATP04040 527 aaKnown RBP7.48□□□□□ -1.21
TDP1-209ENST00000554180 FUCA1P04066 466 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 S100BP04271 92 aaPredicted RBP7.48□□□□□ -1.21
TDP1-209ENST00000554180 HIST1H2AGP0C0S8 130 aaPredicted RBP7.48□□□□□ -1.21
TDP1-209ENST00000554180 SLC35G4P0C7Q5 338 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 THEGLP0DJG4 465 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 ACP5P13686 325 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 HIST1H2ADP20671 130 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 IMPDH1P20839 514 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 ACADLP28330 430 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 CD38P28907 300 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 PBLDP30039 288 aaPredicted RBP7.48□□□□□ -1.21
TDP1-209ENST00000554180 CNR2P34972 360 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 GNPDA1P46926 289 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 PREPP48147 710 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 FNTBP49356 437 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 HNMTP50135 292 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 SRP54P61011 504 aaKnown RBP7.48□□□□□ -1.21
TDP1-209ENST00000554180 OCRLQ01968 901 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 GALNT1Q10472 559 aaPredicted RBP7.48□□□□□ -1.21
TDP1-209ENST00000554180 BST1Q10588 318 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 STX3Q13277 289 aa7.48□□□□□ -1.21
TDP1-209ENST00000554180 RCN2Q14257 317 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms