RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 RAB23Q9ULC3 237 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 GINS2Q9Y248 185 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 FKBP7Q9Y680 259 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 V9GYH0 126 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 SMCHD1A6NHR9 2005 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 COL11A2P13942 1736 aaPredicted RBP9.41□□□□□ -0.9
SIX4-202ENST00000554079 DFFAO00273 331 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 NR5A2O00482 541 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 STX16O14662 325 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 SYN3O14994 580 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 RGS10O43665 173 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 SSX5O60225 188 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 TNFRSF21O75509 655 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 RFPL3O75679 317 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 SNAPINO95295 136 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 LDOC1O95751 146 aaPredicted RBP9.41□□□□□ -0.9
SIX4-202ENST00000554079 TRUB2O95900 331 aaKnown RBP9.41□□□□□ -0.9
SIX4-202ENST00000554079 F9P00740 461 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 APOC1P02654 83 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 CYBBP04839 570 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 F7P08709 466 aaPredicted RBP9.41□□□□□ -0.9
SIX4-202ENST00000554079 ALDOCP09972 364 aaKnown RBP9.41□□□□□ -0.9
SIX4-202ENST00000554079 MLNP12872 115 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 SLC2A4P14672 509 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 SPRP35270 261 aaPredicted RBP9.41□□□□□ -0.9
SIX4-202ENST00000554079 RPL35P42766 123 aaKnown RBP9.41□□□□□ -0.9
SIX4-202ENST00000554079 ERVFC1P60507 584 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 HOXC5Q00444 222 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 SP2Q02086 613 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 CUL2Q13617 745 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 RAPSNQ13702 412 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 SYT16Q17RD7 645 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 Q3ZCU0 254 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 ZMAT1Q5H9K5 638 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 GPRIN3Q6ZVF9 776 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 ABI1Q8IZP0 508 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 HS3ST5Q8IZT8 346 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 FAM9CQ8IZT9 166 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 ACVR1CQ8NER5 493 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 OR6M1Q8NGM8 313 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 ENKURQ8TC29 256 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 ZFPM2Q8WW38 1151 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 ZNF606Q8WXB4 792 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 LPPQ93052 612 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 LRRC58Q96CX6 371 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 COQ8BQ96D53 544 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 SLC47A1Q96FL8 570 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 CERS2Q96G23 380 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 MCCC1Q96RQ3 725 aaPredicted RBP9.41□□□□□ -0.9
SIX4-202ENST00000554079 PEBP4Q96S96 227 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 TBCDQ9BTW9 1192 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 PPIL3Q9H2H8 161 aaKnown RBP9.41□□□□□ -0.9
SIX4-202ENST00000554079 ST6GALNAC4Q9H4F1 302 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 RNF167Q9H6Y7 350 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 APOBEC3GQ9HC16 384 aaKnown RBP9.41□□□□□ -0.9
SIX4-202ENST00000554079 HPF1Q9NWY4 346 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 KIF17Q9P2E2 1029 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 ACSL5Q9ULC5 683 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 PCDHB14Q9Y5E9 798 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 ALG5Q9Y673 324 aa9.41□□□□□ -0.9
SIX4-202ENST00000554079 WDR81Q562E7 1941 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 MICAL3Q7RTP6 2002 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 ZNF638Q14966 1978 aaKnown RBP9.4□□□□□ -0.9
SIX4-202ENST00000554079 ANKRD12Q6UB98 2062 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 IGLV3-22A0A075B6J6 115 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 TRAV20A0A0B4J274 112 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 A0A0J9YYE9 177 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 G3V2T6 193 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 BCKDKO14874 412 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 PRPSAP2O60256 369 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 PSMD10O75832 226 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 LSM8O95777 96 aaKnown RBP9.4□□□□□ -0.9
SIX4-202ENST00000554079 RAF1P04049 648 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 TPOP07202 933 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 ITGAMP11215 1152 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 CPN2P22792 545 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 MGAT1P26572 445 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 KLRK1P26718 216 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 PRKAR1BP31321 381 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 TNFSF8P32971 234 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 CXCR4P61073 352 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 IL5RAQ01344 420 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 LIPEQ05469 1076 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 GPR68Q15743 365 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 GTDC1Q4AE62 458 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 ARMCX4Q5H9R4 360 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 GPATCH4Q5T3I0 446 aaKnown RBP9.4□□□□□ -0.9
SIX4-202ENST00000554079 FCRLBQ6BAA4 426 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 SMYD5Q6GMV2 418 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 SULT1C3Q6IMI6 304 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 CASC4Q6P4E1 433 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 FAM183BPQ6ZVS7 135 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 SLC46A3Q7Z3Q1 461 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 ZDHHC13Q8IUH4 622 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 LRRN4Q8WUT4 740 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 HYLS1Q96M11 299 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 Q96MT0 163 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 SERPINB11Q96P15 392 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 NPAS1Q99742 590 aa9.4□□□□□ -0.9
SIX4-202ENST00000554079 KATNAL1Q9BW62 490 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms