RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 LCA5Q86VQ0 697 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 TBC1D3Q8IZP1 549 aaPredicted RBP4.96□□□□□ -1.62
VTI1B-202ENST00000553619 RBFAQ8N0V3 343 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 SPEM1Q8N4L4 309 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 CAMKK1Q8N5S9 505 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 TRAM1L1Q8N609 369 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 OR13J1Q8NGT2 312 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 OR14C36Q8NHC7 312 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 FAM76AQ8TAV0 307 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 FAM45AQ8TCE6 357 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 DCAKDQ8WVC6 231 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 SREK1Q8WXA9 508 aaKnown RBP4.96□□□□□ -1.62
VTI1B-202ENST00000553619 ASB12Q8WXK4 309 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 ARRDC3Q96B67 414 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 DCUN1D1Q96GG9 259 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 ZNF778Q96MU6 729 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 PANX3Q96QZ0 392 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 RBBP8Q99708 897 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 PLCD4Q9BRC7 762 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 WDR83Q9BRX9 315 aaKnown RBP4.96□□□□□ -1.62
VTI1B-202ENST00000553619 DHRS4Q9BTZ2 278 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 SPATA16Q9BXB7 569 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 IQCGQ9H095 443 aaKnown RBP4.96□□□□□ -1.62
VTI1B-202ENST00000553619 BTBD1Q9H0C5 482 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 RHOJQ9H4E5 214 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 MTG2Q9H4K7 406 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 PREBQ9HCU5 417 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 BPIFA1Q9NP55 256 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 KCNK9Q9NPC2 374 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 ITM2CQ9NQX7 267 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 NKIRAS1Q9NYS0 192 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 NFKBIL1Q9UBC1 381 aaPredicted RBP4.96□□□□□ -1.62
VTI1B-202ENST00000553619 SLC2A6Q9UGQ3 507 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 MID2Q9UJV3 735 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 PRDM4Q9UKN5 801 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 SARDHQ9UL12 918 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 FZD4Q9ULV1 537 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 ANKRD6Q9Y2G4 727 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 VWA7Q9Y334 891 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 SF3B6Q9Y3B4 125 aaKnown RBP4.96□□□□□ -1.62
VTI1B-202ENST00000553619 SIT1Q9Y3P8 196 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 PCDHB1Q9Y5F3 818 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 PCDHGB7Q9Y5F8 929 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 SPO11Q9Y5K1 396 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 FADS3Q9Y5Q0 445 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 TCF20Q9UGU0 1960 aaKnown RBP4.96□□□□□ -1.62
VTI1B-202ENST00000553619 F5P12259 2224 aa4.96□□□□□ -1.62
VTI1B-202ENST00000553619 A0A087X1B8 175 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 TRBV5-4A0A0C4DH59 114 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 A0A1W2PQF6 199 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 TCRBV21S2A2A0A5A6 115 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 UBA6A0AVT1 1052 aaPredicted RBP4.95□□□□□ -1.62
VTI1B-202ENST00000553619 CCDC189A1A4V9 331 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 NPIPB15A6NHN6 443 aaPredicted RBP4.95□□□□□ -1.62
VTI1B-202ENST00000553619 AGAP14A8MT82 685 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 CXorf49A8MYA2 514 aaPredicted RBP4.95□□□□□ -1.62
VTI1B-202ENST00000553619 E5RI56 91 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 GOLGA8TH3BQL2 631 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 COPEO14579 308 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 PRMT5O14744 637 aaPredicted RBP4.95□□□□□ -1.62
VTI1B-202ENST00000553619 AURKAO14965 403 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 AREL1O15033 823 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 TM9SF1O15321 606 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 PLRG1O43660 514 aaKnown RBP4.95□□□□□ -1.62
VTI1B-202ENST00000553619 VPS26AO75436 327 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 HAUS5O94927 633 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 AP2A2O94973 939 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 ZNF205O95201 554 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 SLC25A14O95258 325 aaPredicted RBP4.95□□□□□ -1.62
VTI1B-202ENST00000553619 SLC4A1P02730 911 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 C1QAP02745 245 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 PRKCGP05129 697 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 GSTM1P09488 218 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 C1SP09871 688 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 OR56A5P0C7T3 313 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 PKMP14618 531 aaKnown RBP4.95□□□□□ -1.62
VTI1B-202ENST00000553619 BRAFP15056 766 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 BPIP17213 487 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 PRKCAP17252 672 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 MSH3P20585 1137 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 CD72P21854 359 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 RPS3P23396 243 aaKnown RBP eCLIP4.95□□□□□ -1.62
VTI1B-202ENST00000553619 TEAD1P28347 426 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 GCAP28676 217 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 FOXN2P32314 431 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 MMP12P39900 470 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 SLC26A3P40879 764 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 P2RY2P41231 377 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 NSG1P42857 185 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 SLC1A2P43004 574 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 GPR1P46091 355 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 CXCL12P48061 93 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 SERPINB8P50452 374 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 SLC18A1P54219 525 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 MAGOHP61326 146 aaKnown RBP4.95□□□□□ -1.62
VTI1B-202ENST00000553619 PPP2R2AP63151 447 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 CREB5Q02930 508 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 SLC18A2Q05940 514 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 SIGLEC14Q08ET2 396 aa4.95□□□□□ -1.62
VTI1B-202ENST00000553619 CNTN1Q12860 1018 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms