RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 ZNF639Q9UID6 485 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 EIF3LQ9Y262 564 aaKnown RBP12.7□□□□□ -0.38
SHMT2-205ENST00000553474 INSL5Q9Y5Q6 135 aa12.7□□□□□ -0.38
SHMT2-205ENST00000553474 GLYATL1P3A0A0U1RQE8 302 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 C1orf232A0A0U1RR37 186 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 RNF103-CHMP3A0A140T963 221 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 TRIM64A6NGJ6 449 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 TRIM64CA6NLI5 447 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 SOCS2O14508 198 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 INPP4BO15327 924 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 KATNA1O75449 491 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 BMP10O95393 424 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 EBLN1P0CF75 366 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 ATP6V1B1P15313 513 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 CKMT2P17540 419 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 SPAM1P38567 509 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 NSG1P42857 185 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 MERTKQ12866 999 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 PWP1Q13610 501 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 GK3PQ14409 553 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 NR6A1Q15406 480 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 TIGD2Q4W5G0 525 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 GPRC6AQ5T6X5 926 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 CYP20A1Q6UW02 462 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 HTR3DQ70Z44 454 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 TRIM46Q7Z4K8 759 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 SLC39A11Q8N1S5 342 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 SFRP1Q8N474 314 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 CBR4Q8N4T8 237 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 ZBTB2Q8N680 514 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 OR52E4Q8NGH9 312 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 ADAMTS16Q8TE57 1224 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 ADAMTS19Q8TE59 1207 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 WBP2Q969T9 261 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 CCDC115Q96NT0 180 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 SMIM14Q96QK8 99 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 ZBTB18Q99592 522 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 ADI1Q9BV57 179 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 SLC29A3Q9BZD2 475 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 CD244Q9BZW8 370 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 GRIP2Q9C0E4 1043 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 IL26Q9NPH9 171 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 OPTCQ9UBM4 332 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 PPIL1Q9Y3C6 166 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 LAMA2P24043 3122 aaKnown RBP12.69□□□□□ -0.38
SHMT2-205ENST00000553474 TRIOBPQ9H2D6 2365 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 A0A087WXM4 84 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 ANKRD28O15084 1053 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 GMNNO75496 209 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 KCNH1O95259 989 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 LDLRP01130 860 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 IL6P05231 212 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 CDH1P12830 882 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 MYOGP15173 224 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 VARSP26640 1264 aaKnown RBP12.69□□□□□ -0.38
SHMT2-205ENST00000553474 AKT1P31749 480 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 ALDH3B2P48448 385 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 SLC7A9P82251 487 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 CDKN3Q16667 212 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 AP5B1Q2VPB7 878 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 EML3Q32P44 896 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 SLC36A3Q495N2 470 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.69□□□□□ -0.38
SHMT2-205ENST00000553474 FBXO48Q5FWF7 155 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 RABL3Q5HYI8 236 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 ATXN7L2Q5T6C5 722 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-205ENST00000553474 FAM151BQ6UXP7 276 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 DLEU7Q6UYE1 221 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 DDX53Q86TM3 631 aaKnown RBP12.69□□□□□ -0.38
SHMT2-205ENST00000553474 CMTR2Q8IYT2 770 aaKnown RBP12.69□□□□□ -0.38
SHMT2-205ENST00000553474 TDHQ8IZJ6 230 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 TCAIMQ8N3R3 496 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 ZFP28Q8NHY6 868 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 FIBINQ8TAL6 211 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 PHOSPHO2Q8TCD6 241 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 MAGEB10Q96LZ2 347 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-205ENST00000553474 NSMCE2Q96MF7 247 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 C1orf50Q9BV19 199 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 OSBPL6Q9BZF3 934 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 RC3H2Q9HBD1 1191 aaKnown RBP12.69□□□□□ -0.38
SHMT2-205ENST00000553474 MRPL17Q9NRX2 175 aaKnown RBP12.69□□□□□ -0.38
SHMT2-205ENST00000553474 SMPD4Q9NXE4 827 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 KCTD5Q9NXV2 234 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 CRLS1Q9UJA2 301 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 PCDHGB4Q9UN71 923 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 FNDC3AQ9Y2H6 1198 aaKnown RBP12.69□□□□□ -0.38
SHMT2-205ENST00000553474 ASB1Q9Y576 335 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 ANGPTL3Q9Y5C1 460 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 PCDHGB5Q9Y5G0 923 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 CPQQ9Y646 472 aa12.69□□□□□ -0.38
SHMT2-205ENST00000553474 K7EPI3 171 aa12.68□□□□□ -0.38
SHMT2-205ENST00000553474 ZNF701M0R085 212 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-205ENST00000553474 SLC25A14O95258 325 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-205ENST00000553474 ALPIP09923 528 aa12.68□□□□□ -0.38
SHMT2-205ENST00000553474 LAG3P18627 525 aa12.68□□□□□ -0.38
SHMT2-205ENST00000553474 IL12AP29459 219 aa12.68□□□□□ -0.38
SHMT2-205ENST00000553474 TTKP33981 857 aa12.68□□□□□ -0.38
SHMT2-205ENST00000553474 ARL1P40616 181 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-205ENST00000553474 SNRPD1P62314 119 aaKnown RBP12.68□□□□□ -0.38
SHMT2-205ENST00000553474 MYLK3Q32MK0 819 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms