RNA–Protein interactions for RNA: ENST00000553331.5

PNN-202, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3 BASIC

Gene PNN, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-202ENST00000553331 POLR2CP19387 275 aaPredicted RBP17.47■□□□□ 0.39
PNN-202ENST00000553331 MSNP26038 577 aaKnown RBP17.47■□□□□ 0.39
PNN-202ENST00000553331 GRIA1P42261 906 aa17.47■□□□□ 0.39
PNN-202ENST00000553331 PREPP48147 710 aa17.47■□□□□ 0.39
PNN-202ENST00000553331 CDH17Q12864 832 aa17.47■□□□□ 0.39
PNN-202ENST00000553331 TUBB3Q13509 450 aa17.47■□□□□ 0.39
PNN-202ENST00000553331 BRD3Q15059 726 aa17.47■□□□□ 0.39
PNN-202ENST00000553331 CAPRIN2Q6IMN6 1127 aaKnown RBP17.47■□□□□ 0.39
PNN-202ENST00000553331 ZNF449Q6P9G9 518 aa17.47■□□□□ 0.39
PNN-202ENST00000553331 FBXO38Q6PIJ6 1188 aa17.47■□□□□ 0.39
PNN-202ENST00000553331 PPP1R3BQ86XI6 285 aa17.47■□□□□ 0.39
PNN-202ENST00000553331 PHC3Q8NDX5 983 aa17.47■□□□□ 0.39
PNN-202ENST00000553331 C19orf43Q9BQ61 176 aa17.47■□□□□ 0.39
PNN-202ENST00000553331 EFHD1Q9BUP0 239 aa17.47■□□□□ 0.39
PNN-202ENST00000553331 FRMD8P1Q9BZ68 369 aaPredicted RBP17.47■□□□□ 0.39
PNN-202ENST00000553331 PDE7BQ9NP56 450 aa17.47■□□□□ 0.39
PNN-202ENST00000553331 RAB6BQ9NRW1 208 aa17.47■□□□□ 0.39
PNN-202ENST00000553331 RARRES3Q9UL19 164 aa17.47■□□□□ 0.39
PNN-202ENST00000553331 HEBP2Q9Y5Z4 205 aa17.47■□□□□ 0.39
PNN-202ENST00000553331 MRPS18BQ9Y676 258 aaKnown RBP17.47■□□□□ 0.39
PNN-202ENST00000553331 PIKFYVEQ9Y2I7 2098 aa17.47■□□□□ 0.39
PNN-202ENST00000553331 FASNP49327 2511 aaKnown RBP17.46■□□□□ 0.39
PNN-202ENST00000553331 IGLV3-16A0A075B6K0 115 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 C17orf113A0A1B0GUU1 675 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 CCDC162PA2VCL2 907 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 GSAPA4D1B5 854 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 TLCD2A6NGC4 264 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 MROH6A6NGR9 719 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 B8ZZF3 427 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 H7C0S8 307 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 IFRD1O00458 451 aaPredicted RBP17.46■□□□□ 0.39
PNN-202ENST00000553331 ZSCAN5DPP0CG00 497 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 FGF5P12034 268 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 NDUFS1P28331 727 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 PDHA2P29803 388 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 DLSTP36957 453 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 STAT5AP42229 794 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 PRKAA1Q13131 559 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 BORAQ6PGQ7 559 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 PRICKLE2Q7Z3G6 844 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 ZFPM2Q8WW38 1151 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 LCN9Q8WX39 176 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 SLC45A3Q96JT2 553 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 PPM1MQ96MI6 270 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 FAM117AQ9C073 453 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 SOHLH2Q9NX45 425 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 SLC2A6Q9UGQ3 507 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 CROTQ9UKG9 612 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 PYCARDQ9ULZ3 195 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 HEMK1Q9Y5R4 338 aaPredicted RBP17.46■□□□□ 0.39
PNN-202ENST00000553331 PRSS21Q9Y6M0 314 aa17.46■□□□□ 0.39
PNN-202ENST00000553331 USP27XA6NNY8 438 aa17.45■□□□□ 0.38
PNN-202ENST00000553331 ERI2A8K979 691 aaKnown RBP17.45■□□□□ 0.38
PNN-202ENST00000553331 PYCARD-AS1I3L0S3 204 aa17.45■□□□□ 0.38
PNN-202ENST00000553331 KATNA1O75449 491 aa17.45■□□□□ 0.38
PNN-202ENST00000553331 ZIC2O95409 532 aaPredicted RBP17.45■□□□□ 0.38
PNN-202ENST00000553331 TIAF1O95411 115 aa17.45■□□□□ 0.38
PNN-202ENST00000553331 CCNYL3P0C7X3 344 aa17.45■□□□□ 0.38
PNN-202ENST00000553331 KPNA2P52292 529 aaKnown RBP17.45■□□□□ 0.38
PNN-202ENST00000553331 NFKB2Q00653 900 aa17.45■□□□□ 0.38
PNN-202ENST00000553331 PRKG2Q13237 762 aa17.45■□□□□ 0.38
PNN-202ENST00000553331 ATP1A1-AS1Q5TC04 95 aa17.45■□□□□ 0.38
PNN-202ENST00000553331 CYB5D1Q6P9G0 228 aa17.45■□□□□ 0.38
PNN-202ENST00000553331 NAPRTQ6XQN6 538 aa17.45■□□□□ 0.38
PNN-202ENST00000553331 GLIS1Q8NBF1 620 aa17.45■□□□□ 0.38
PNN-202ENST00000553331 ACVR1CQ8NER5 493 aa17.45■□□□□ 0.38
PNN-202ENST00000553331 STARD8Q92502 1023 aa17.45■□□□□ 0.38
PNN-202ENST00000553331 HDAC10Q969S8 669 aa17.45■□□□□ 0.38
PNN-202ENST00000553331 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.45■□□□□ 0.38
PNN-202ENST00000553331 SLC41A2Q96JW4 573 aa17.45■□□□□ 0.38
PNN-202ENST00000553331 CD180Q99467 661 aa17.45■□□□□ 0.38
PNN-202ENST00000553331 NRTNQ99748 197 aa17.45■□□□□ 0.38
PNN-202ENST00000553331 OR52A5Q9H2C5 316 aa17.45■□□□□ 0.38
PNN-202ENST00000553331 SRMSQ9H3Y6 488 aa17.45■□□□□ 0.38
PNN-202ENST00000553331 TRMT1Q9NXH9 659 aaKnown RBP17.45■□□□□ 0.38
PNN-202ENST00000553331 HEATR9A2RTY3 570 aa17.44■□□□□ 0.38
PNN-202ENST00000553331 SLC28A2O43868 658 aa17.44■□□□□ 0.38
PNN-202ENST00000553331 AP2A2O94973 939 aa17.44■□□□□ 0.38
PNN-202ENST00000553331 NTRK1P04629 796 aa17.44■□□□□ 0.38
PNN-202ENST00000553331 APRTP07741 180 aa17.44■□□□□ 0.38
PNN-202ENST00000553331 TCN2P20062 427 aa17.44■□□□□ 0.38
PNN-202ENST00000553331 CDH3P22223 829 aa17.44■□□□□ 0.38
PNN-202ENST00000553331 F8A1P23610 371 aa17.44■□□□□ 0.38
PNN-202ENST00000553331 CCR10P46092 362 aa17.44■□□□□ 0.38
PNN-202ENST00000553331 HSD11B2P80365 405 aa17.44■□□□□ 0.38
PNN-202ENST00000553331 ACY1Q03154 408 aa17.44■□□□□ 0.38
PNN-202ENST00000553331 CDC20Q12834 499 aa17.44■□□□□ 0.38
PNN-202ENST00000553331 MAP7Q14244 749 aa17.44■□□□□ 0.38
PNN-202ENST00000553331 SIX1Q15475 284 aaPredicted RBP17.44■□□□□ 0.38
PNN-202ENST00000553331 GPR19Q15760 415 aa17.44■□□□□ 0.38
PNN-202ENST00000553331 KCTD19Q17RG1 926 aaPredicted RBP17.44■□□□□ 0.38
PNN-202ENST00000553331 DEFB109BQ30KR1 87 aa17.44■□□□□ 0.38
PNN-202ENST00000553331 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.44■□□□□ 0.38
PNN-202ENST00000553331 TSTD2Q5T7W7 516 aa17.44■□□□□ 0.38
PNN-202ENST00000553331 PWWP2BQ6NUJ5 590 aa17.44■□□□□ 0.38
PNN-202ENST00000553331 GSTA5Q7RTV2 222 aa17.44■□□□□ 0.38
PNN-202ENST00000553331 OR6P1Q8NGX9 317 aa17.44■□□□□ 0.38
PNN-202ENST00000553331 ELMO1Q92556 727 aa17.44■□□□□ 0.38
PNN-202ENST00000553331 HGH1Q9BTY7 390 aa17.44■□□□□ 0.38
PNN-202ENST00000553331 XKR8Q9H6D3 395 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms