RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 COG1Q8WTW3 980 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 SYN2Q92777 582 aaPredicted RBP11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 GLYATL1Q969I3 302 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 PPM1MQ96MI6 270 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 DPH2Q9BQC3 489 aaPredicted RBP11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 ACTR5Q9H9F9 607 aaPredicted RBP11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 SEPT11Q9NVA2 429 aaKnown RBP11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 P4HTMQ9NXG6 502 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 AIPL1Q9NZN9 384 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 TMPRSS11EQ9UL52 423 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 MYO6Q9UM54 1294 aa11.06□□□□□ -0.64
SUPT16H-202ENST00000552829 PRPSAP2O60256 369 aa11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 IPO7O95373 1038 aaKnown RBP11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 SSTR2P30874 369 aa11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 KPNA2P52292 529 aaKnown RBP11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 DSC2Q02487 901 aa11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 NIPAL4Q0D2K0 466 aa11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 MAMLD1Q13495 774 aa11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 ANKRD20A8PQ5CZ79 823 aa11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 PDPK2PQ6A1A2 396 aa11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 CCDC170Q8IYT3 715 aa11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 NXPE1Q8N323 547 aa11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 ZNF808Q8N4W9 903 aaPredicted RBP11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 ATPAF2Q8N5M1 289 aa11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 TRAM1L1Q8N609 369 aa11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 NSMCE1Q8WV22 266 aa11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 MAML1Q92585 1016 aa11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 CLIP3Q96DZ5 547 aa11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 TRAPPC9Q96Q05 1148 aa11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 ZSCAN5AQ9BUG6 496 aa11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 NUP85Q9BW27 656 aa11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 SPATA16Q9BXB7 569 aa11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 POLR1EQ9GZS1 481 aaKnown RBP11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 PCDH9Q9HC56 1237 aa11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 SYTL2Q9HCH5 934 aa11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 LZTFL1Q9NQ48 299 aa11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 HRASLS2Q9NWW9 162 aa11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 TRIM10Q9UDY6 481 aa11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 PADI2Q9Y2J8 665 aa11.05□□□□□ -0.64
SUPT16H-202ENST00000552829 TMEM191CA6NGB0 347 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 ANKRD66B4E2M5 251 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 PCDH17O14917 1159 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 KCNJ13O60928 360 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 JRKO75564 520 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 CDK14O94921 469 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 TNNT1P13805 278 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 PSMA2P25787 234 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 PRKCIP41743 596 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 TDGF1P3P51864 188 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 ADCY2Q08462 1091 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 DMPKQ09013 629 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 SPA17Q15506 151 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 DPYSL2Q16555 572 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 ASTE1Q2TB18 679 aaPredicted RBP11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 FCRL6Q6DN72 434 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 PLEKHA7Q6IQ23 1121 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 RPUSD3Q6P087 351 aaKnown RBP11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 DUS1LQ6P1R4 473 aaKnown RBP11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 FBXO38Q6PIJ6 1188 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 TMCO3Q6UWJ1 677 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 PPP1R32Q7Z5V6 425 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 MRGPRGQ86SM5 289 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 PACS2Q86VP3 889 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 LRRC49Q8IUZ0 686 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 LPCAT1Q8NF37 534 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 CCHCR1Q8TD31 782 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 ZNF592Q92610 1267 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 CCDC120Q96HB5 630 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 TRIM56Q9BRZ2 755 aaKnown RBP11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 TLR10Q9BXR5 811 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 TRIM7Q9C029 511 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 ZWILCHQ9H900 591 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 ATP13A2Q9NQ11 1180 aa11.04□□□□□ -0.64
SUPT16H-202ENST00000552829 PRRC2AP48634 2157 aaKnown RBP11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 A0A087X0T9 212 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 SLC9B1P1A6NJY1 282 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 TMCO5BA8MYB1 307 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 TMEM150CB9EJG8 249 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 C9J4A7 227 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 H3BRJ5 948 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 PEX12O00623 359 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 LDB2O43679 373 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 CNOT3O75175 753 aaKnown RBP11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 MTX2O75431 263 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 FAM228BP0C875 321 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 DESP17661 470 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 IL1R2P27930 398 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 ARHGAP25P42331 645 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 HALP42357 657 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 MAGEA1P43355 309 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 ZNF169Q14929 603 aaPredicted RBP11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 ACAD10Q6JQN1 1059 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 FAM83HQ6ZRV2 1179 aaPredicted RBP11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 CDH24Q86UP0 819 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 TMEM151BQ8IW70 566 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 OR2Y1Q8NGV0 311 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 DNAJB14Q8TBM8 379 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 ZFPM2Q8WW38 1151 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 FATE1Q969F0 183 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 HDAC11Q96DB2 347 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms