RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 TM4SF5O14894 197 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 RIPK2O43353 540 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 VEGFDO43915 354 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 NUAK1O60285 661 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 SNX2O60749 519 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 DNAJC6O75061 913 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 VAPBO95292 243 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 RALBP11234 206 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 ACTR1BP42025 376 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 SERPINB4P48594 390 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 ACTR1AP61163 376 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 SIM1P81133 766 aaPredicted RBP9.79□□□□□ -0.84
LETMD1-234ENST00000552645 DAB2P98082 770 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 MGAT5Q09328 741 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 RCN2Q14257 317 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 PUM1Q14671 1186 aaKnown RBP eCLIP9.79□□□□□ -0.84
LETMD1-234ENST00000552645 TRIP6Q15654 476 aaKnown RBP9.79□□□□□ -0.84
LETMD1-234ENST00000552645 HIF1AQ16665 826 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 INSCQ1MX18 579 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 GPR33Q49SQ1 333 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 FASTKD1Q53R41 847 aaKnown RBP9.79□□□□□ -0.84
LETMD1-234ENST00000552645 CGB2Q6NT52 195 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 AFTPHQ6ULP2 937 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 TRMT10CQ7L0Y3 403 aaKnown RBP9.79□□□□□ -0.84
LETMD1-234ENST00000552645 PIP4P1Q86T03 277 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 LRRTM4Q86VH4 590 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 EXOC3L1Q86VI1 746 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 SERPINA9Q86WD7 417 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 TRIM42Q8IWZ5 723 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 PIANPQ8IYJ0 282 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 PDIK1LQ8N165 341 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 NXPE1Q8N323 547 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 RASGEF1AQ8N9B8 481 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 PHC3Q8NDX5 983 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 DDHD1Q8NEL9 900 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 OR4L1Q8NH43 312 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 OR4C6Q8NH72 309 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.79□□□□□ -0.84
LETMD1-234ENST00000552645 ZNF669Q96BR6 464 aaPredicted RBP9.79□□□□□ -0.84
LETMD1-234ENST00000552645 ULK4Q96C45 1275 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 SGF29Q96ES7 293 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 CCDC97Q96F63 343 aaPredicted RBP9.79□□□□□ -0.84
LETMD1-234ENST00000552645 COPS8Q99627 209 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 SLX1AQ9BQ83 275 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 CENPKQ9BS16 269 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 KIFC1Q9BW19 673 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 GSDMCQ9BYG8 508 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 RMI1Q9H9A7 625 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 GALNT8Q9NY28 637 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 DLL3Q9NYJ7 618 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 SOX13Q9UN79 622 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 ZNF232Q9UNY5 417 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 GPR34Q9UPC5 381 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 ACTL7BQ9Y614 415 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 CSNK1G3Q9Y6M4 447 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 USH1CQ9Y6N9 552 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 SPEGQ15772 3267 aa9.79□□□□□ -0.84
LETMD1-234ENST00000552645 TMEM120BA0PK00 339 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 CFAP99D6REC4 459 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 H7C0S8 307 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 KMOO15229 486 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 TCEA3O75764 348 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 KCNK5O95279 499 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 ACRV1P26436 265 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 DNAJC3Q13217 504 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 TMED1Q13445 227 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 SLC29A2Q14542 456 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 SEPT7Q16181 437 aaKnown RBP9.78□□□□□ -0.84
LETMD1-234ENST00000552645 CNPY1Q3B7I2 92 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 MSS51Q4VC12 460 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 PPM1JQ5JR12 505 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 TMEM220Q6QAJ8 160 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 DBX2Q6ZNG2 339 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 RGS9BPQ6ZS82 235 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 LDB1Q86U70 411 aaPredicted RBP9.78□□□□□ -0.84
LETMD1-234ENST00000552645 MYLK4Q86YV6 388 aaPredicted RBP9.78□□□□□ -0.84
LETMD1-234ENST00000552645 ANKMY2Q8IV38 441 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 BEND7Q8N7W2 519 aaPredicted RBP9.78□□□□□ -0.84
LETMD1-234ENST00000552645 BBOF1Q8ND07 529 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 DTX3LQ8TDB6 740 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 EPS8L3Q8TE67 593 aaKnown RBP9.78□□□□□ -0.84
LETMD1-234ENST00000552645 CFAP36Q96G28 342 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 SCARF2Q96GP6 870 aaPredicted RBP9.78□□□□□ -0.84
LETMD1-234ENST00000552645 APOLD1Q96LR9 279 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 CDC6Q99741 560 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 DUSP23Q9BVJ7 150 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 BOCQ9BWV1 1114 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 TREX1Q9NSU2 369 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 CATSPERZQ9NTU4 200 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 SMOXQ9NWM0 555 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 TRNAU1APQ9NX07 287 aaKnown RBP9.78□□□□□ -0.84
LETMD1-234ENST00000552645 GRHL1Q9NZI5 618 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 TAAR2Q9P1P5 351 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 RP1P56715 2156 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 TRBV23OR9-2A0A075B6M9 112 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 TLDC2A0PJX2 215 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 MAGEB16A2A368 324 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 CPED1A4D0V7 1026 aa9.78□□□□□ -0.84
LETMD1-234ENST00000552645 CD3EAPO15446 510 aaKnown RBP9.78□□□□□ -0.84
LETMD1-234ENST00000552645 CBFA2T3O75081 653 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms