RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 SUFUQ9UMX1 484 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 DYRK1BQ9Y463 629 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 MYO16Q9Y6X6 1858 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 SIP14410 1827 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 SYCE1LA8MT33 242 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 DCXO43602 365 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 SEC22BO75396 215 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 ENO3P13929 434 aaPredicted RBP8.02□□□□□ -1.13
CHPT1-208ENST00000552215 POLR2CP19387 275 aaPredicted RBP8.02□□□□□ -1.13
CHPT1-208ENST00000552215 CKAP5Q14008 2032 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 CCSMST1Q4G0I0 132 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 TMEM198Q66K66 360 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 ALYREFQ86V81 257 aaKnown RBP8.02□□□□□ -1.13
CHPT1-208ENST00000552215 RNF175Q8N4F7 328 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 RAB42Q8N4Z0 105 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 METTL27Q8N6F8 245 aaPredicted RBP8.02□□□□□ -1.13
CHPT1-208ENST00000552215 EIF1ADQ8N9N8 165 aaKnown RBP8.02□□□□□ -1.13
CHPT1-208ENST00000552215 OR5AR1Q8NGP9 310 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 SELENOMQ8WWX9 145 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 NCSTNQ92542 709 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 COL26A1Q96A83 441 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 LMLNQ96KR4 655 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 CCDC167Q9P0B6 97 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 SLC12A4Q9UP95 1085 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 VPS13AQ96RL7 3174 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 A0A1B0GVT2 93 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 H3BMM5 538 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 KLHL2O95198 593 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 ZNF30P17039 623 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 ALAS2P22557 587 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 ATP5F1P24539 256 aaPredicted RBP8.02□□□□□ -1.13
CHPT1-208ENST00000552215 CCR7P32248 378 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 MMP12P39900 470 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 CASP9P55211 416 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 HMGCS1Q01581 520 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 OR4D1Q15615 310 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 ADHFE1Q8IWW8 467 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 ZCCHC10Q8TBK6 192 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 PTCD2Q8WV60 388 aaKnown RBP8.02□□□□□ -1.13
CHPT1-208ENST00000552215 TCEAL2Q9H3H9 227 aaPredicted RBP8.02□□□□□ -1.13
CHPT1-208ENST00000552215 TREX1Q9NSU2 369 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 APOBEC3BQ9UH17 382 aaKnown RBP8.02□□□□□ -1.13
CHPT1-208ENST00000552215 SLC27A6Q9Y2P4 619 aa8.02□□□□□ -1.13
CHPT1-208ENST00000552215 TMEM265A0A087WTH1 108 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 MAGEC1O60732 1142 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 C9P02748 559 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 SERPINE1P05121 402 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 MSX2P35548 267 aaPredicted RBP8.01□□□□□ -1.13
CHPT1-208ENST00000552215 RAP1GDS1P52306 607 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 PRKAA1Q13131 559 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 PGS1Q32NB8 556 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 TRIM73Q86UV7 250 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 KBTBD6Q86V97 674 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 ZNF276Q8N554 614 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 FNDC5Q8NAU1 212 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 RNF217Q8TC41 542 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 LPGAT1Q92604 370 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 DTD2Q96FN9 168 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 SLC38A3Q99624 504 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 GPR22Q99680 433 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 MRPL57Q9BQC6 102 aaKnown RBP8.01□□□□□ -1.13
CHPT1-208ENST00000552215 TAC3Q9UHF0 121 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 STOML2Q9UJZ1 356 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 A0A087X1B8 175 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 TRAFD1O14545 582 aaPredicted RBP8.01□□□□□ -1.13
CHPT1-208ENST00000552215 BPGMP07738 259 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 SKIV2L2P42285 1042 aaKnown RBP8.01□□□□□ -1.13
CHPT1-208ENST00000552215 KCNC1P48547 511 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 PLA2G16P53816 162 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 CDK3Q00526 305 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 CUL3Q13618 768 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 SIM2Q14190 667 aaPredicted RBP8.01□□□□□ -1.13
CHPT1-208ENST00000552215 TSNAXIP1Q2TAA8 658 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 PTCHD3Q3KNS1 767 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 LDLRAP1Q5SW96 308 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 PNCKQ6P2M8 343 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 OOSP2Q86WS3 158 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 ISG20Q96AZ6 181 aaKnown RBP8.01□□□□□ -1.13
CHPT1-208ENST00000552215 PTERQ96BW5 349 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 TRIB3Q96RU7 358 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 CCM2Q9BSQ5 444 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 APOOQ9BUR5 198 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 EBPLQ9BY08 206 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 CDH19Q9H159 772 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 EML4Q9HC35 981 aaKnown RBP8.01□□□□□ -1.13
CHPT1-208ENST00000552215 FGF22Q9HCT0 170 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 MARK1Q9P0L2 795 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 MMP17Q9ULZ9 603 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 A0A0J9YVX5 310 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 CBX6O95503 412 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 APBB3O95704 486 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 ZNF37AP17032 561 aaPredicted RBP8.01□□□□□ -1.13
CHPT1-208ENST00000552215 CD6P30203 668 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 FOXM1Q08050 763 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 DLG1Q12959 904 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 ART3Q13508 389 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 DEFB110Q30KQ9 67 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 GPR33Q49SQ1 333 aa8.01□□□□□ -1.13
CHPT1-208ENST00000552215 EZH1Q92800 747 aaPredicted RBP8.01□□□□□ -1.13
CHPT1-208ENST00000552215 EBF4Q9BQW3 602 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms