RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 TIFAQ96CG3 184 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 DCUN1D1Q96GG9 259 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 COQ10AQ96MF6 247 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 VPS35Q96QK1 796 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 ZSCAN5AQ9BUG6 496 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 BRINP2Q9C0B6 783 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 IPPKQ9H8X2 491 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 SLC52A3Q9NQ40 469 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 RIC8BQ9NVN3 520 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 TRPS1Q9UHF7 1281 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 CROTQ9UKG9 612 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 LRRC42Q9Y546 428 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 DOCK9Q9BZ29 2069 aa11.29□□□□□ -0.6
RAB5C-208ENST00000551338 CROCCQ5TZA2 2017 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 C9JVG2 144 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 CFAP99D6REC4 459 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 E7ENX8 843 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 SLC16A5O15375 505 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 KATNA1O75449 491 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 WDR47O94967 919 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 OTCP00480 354 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 C8GP07360 202 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 ANXA5P08758 320 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 ENO2P09104 434 aaPredicted RBP11.28□□□□□ -0.6
RAB5C-208ENST00000551338 ELFN1P0C7U0 828 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 EPORP19235 508 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 MSH3P20585 1137 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 ITGB7P26010 798 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 OPRD1P41143 372 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 GDF5P43026 501 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 ERVK-8P63133 956 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 MS4A2Q01362 244 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 CREB5Q02930 508 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 GRIK2Q13002 908 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 SP140Q13342 867 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 BOP1Q14137 746 aaKnown RBP11.28□□□□□ -0.6
RAB5C-208ENST00000551338 ZNF234Q14588 700 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 ACOX1Q15067 660 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 ZXDCQ2QGD7 858 aaPredicted RBP11.28□□□□□ -0.6
RAB5C-208ENST00000551338 C6orf136Q5SQH8 315 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 C9orf64Q5T6V5 341 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 TANGO2Q6ICL3 276 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 ERAP2Q6P179 960 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 IL27RAQ6UWB1 636 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 LAYNQ6UX15 382 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 NEK10Q6ZWH5 1172 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 UBE2R2Q712K3 238 aaPredicted RBP11.28□□□□□ -0.6
RAB5C-208ENST00000551338 MILR1Q7Z6M3 343 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 DHDDSQ86SQ9 333 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 KBTBD6Q86V97 674 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 KBTBD2Q8IY47 623 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 NRSN1Q8IZ57 195 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 CHCHD4Q8N4Q1 142 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 RNF148Q8N7C7 305 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 TERB1Q8NA31 727 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 HIPK4Q8NE63 616 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 PIP4K2CQ8TBX8 421 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 METTL6Q8TCB7 284 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 SLC26A7Q8TE54 656 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 BTN2A2Q8WVV5 523 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 ATP6V1E2Q96A05 226 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 DTD2Q96FN9 168 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 CDCA3Q99618 268 aaPredicted RBP11.28□□□□□ -0.6
RAB5C-208ENST00000551338 CCT7Q99832 543 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 C1orf50Q9BV19 199 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 SLC12A9Q9BXP2 914 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 TMEM245Q9H330 911 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 PFDN4Q9NQP4 134 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 GDE1Q9NZC3 331 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 DEC1Q9P2X7 70 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 SUCOQ9UBS9 1254 aaKnown RBP11.28□□□□□ -0.6
RAB5C-208ENST00000551338 ANGPTL3Q9Y5C1 460 aa11.28□□□□□ -0.6
RAB5C-208ENST00000551338 ASPDHA6ND91 283 aa11.27□□□□□ -0.61
RAB5C-208ENST00000551338 ANTXRLA6NF34 631 aa11.27□□□□□ -0.61
RAB5C-208ENST00000551338 FXYD1O00168 92 aa11.27□□□□□ -0.61
RAB5C-208ENST00000551338 QSOX1O00391 747 aa11.27□□□□□ -0.61
RAB5C-208ENST00000551338 PLK4O00444 970 aa11.27□□□□□ -0.61
RAB5C-208ENST00000551338 ACOT8O14734 319 aa11.27□□□□□ -0.61
RAB5C-208ENST00000551338 AREL1O15033 823 aa11.27□□□□□ -0.61
RAB5C-208ENST00000551338 LINC01565O15544 149 aa11.27□□□□□ -0.61
RAB5C-208ENST00000551338 MAP3K7O43318 606 aa11.27□□□□□ -0.61
RAB5C-208ENST00000551338 SYNCRIPO60506 623 aaKnown RBP11.27□□□□□ -0.61
RAB5C-208ENST00000551338 BCAS2O75934 225 aaPredicted RBP11.27□□□□□ -0.61
RAB5C-208ENST00000551338 SOD1P00441 154 aa11.27□□□□□ -0.61
RAB5C-208ENST00000551338 FTH1P02794 183 aa11.27□□□□□ -0.61
RAB5C-208ENST00000551338 ACADSP16219 412 aa11.27□□□□□ -0.61
RAB5C-208ENST00000551338 ATP6V1C1P21283 382 aa11.27□□□□□ -0.61
RAB5C-208ENST00000551338 MSX2P35548 267 aaPredicted RBP11.27□□□□□ -0.61
RAB5C-208ENST00000551338 GGT5P36269 586 aa11.27□□□□□ -0.61
RAB5C-208ENST00000551338 ARL1P40616 181 aaPredicted RBP11.27□□□□□ -0.61
RAB5C-208ENST00000551338 SLC6A12P48065 614 aa11.27□□□□□ -0.61
RAB5C-208ENST00000551338 RPIAP49247 311 aa11.27□□□□□ -0.61
RAB5C-208ENST00000551338 CTSCP53634 463 aa11.27□□□□□ -0.61
RAB5C-208ENST00000551338 HSPA14Q0VDF9 509 aa11.27□□□□□ -0.61
RAB5C-208ENST00000551338 FLOT2Q14254 428 aa11.27□□□□□ -0.61
RAB5C-208ENST00000551338 GRIN2CQ14957 1233 aa11.27□□□□□ -0.61
RAB5C-208ENST00000551338 LDLRAP1Q5SW96 308 aa11.27□□□□□ -0.61
RAB5C-208ENST00000551338 PPP2R2DQ66LE6 453 aa11.27□□□□□ -0.61
RAB5C-208ENST00000551338 SYCE2Q6PIF2 218 aa11.27□□□□□ -0.61
RAB5C-208ENST00000551338 BLOC1S3Q6QNY0 202 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms