RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 IFNB1P01574 187 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 APOA1P02647 267 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 ADORA3P0DMS8 318 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 POU3F3P20264 500 aaPredicted RBP5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 KDELR1P24390 212 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 EEF1B2P24534 225 aaKnown RBP5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 RECQLP46063 649 aaPredicted RBP5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 NSFP46459 744 aaKnown RBP5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 NPTX2P47972 431 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 GIPRP48546 466 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 ARSFP54793 590 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 DEFA1P59665 94 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 DEFA3P59666 94 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 ERVK-21P61565 698 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 NCS1P62166 190 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 SLC35A2P78381 396 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 CCNA1P78396 465 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 GTF2BQ00403 316 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 EPS8Q12929 822 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 GALEQ14376 348 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 IRF3Q14653 427 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 PLCL1Q15111 1095 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 HKDC1Q2TB90 917 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 HSDL1Q3SXM5 330 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 FBXO43Q4G163 708 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 BCL7AQ4VC05 210 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 GLRA4Q5JXX5 417 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 CLLU1Q5K131 121 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 COLEC12Q5KU26 742 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 TMEM198Q66K66 360 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 SEL1L3Q68CR1 1132 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 TIGD7Q6NT04 549 aaPredicted RBP5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 TAF2Q6P1X5 1199 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 TMEM81Q6P7N7 255 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 DARS2Q6PI48 645 aaKnown RBP5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 C19orf48Q6RUI8 117 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 MACC1Q6ZN28 852 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 C22orf34Q6ZV56 151 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 ANKS3Q6ZW76 656 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 ADCK1Q86TW2 530 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 RBM23Q86U06 439 aaKnown RBP5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 P2RY8Q86VZ1 359 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 ERO1BQ86YB8 467 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 RAB43Q86YS6 212 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 FUNDC1Q8IVP5 155 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 CCDC103Q8IW40 242 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 TAB3Q8N5C8 712 aaPredicted RBP5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 FAM169BQ8N8A8 192 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 XXYLT1Q8NBI6 393 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 APPL2Q8NEU8 664 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 OR8K5Q8NH50 307 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 BAHD1Q8TBE0 780 aaPredicted RBP5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 FRS2Q8WU20 508 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 DNAJA4Q8WW22 397 aaPredicted RBP5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 RSAD2Q8WXG1 361 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 CPA5Q8WXQ8 436 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 UFD1Q92890 307 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 COA7Q96BR5 231 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 TMCO6Q96DC7 493 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 VWCEQ96DN2 955 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 MAGEB10Q96LZ2 347 aaPredicted RBP5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 SORCS2Q96PQ0 1159 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 TTYH2Q9BSA4 534 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 IER2Q9BTL4 223 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 BDH2Q9BUT1 245 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 C1QTNF1Q9BXJ1 281 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 AMBRA1Q9C0C7 1298 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 UPF3AQ9H1J1 476 aaKnown RBP5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 SLC6A17Q9H1V8 727 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 LHX5Q9H2C1 402 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 ADNPQ9H2P0 1102 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 PPA2Q9H2U2 334 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 KAT8Q9H7Z6 458 aaKnown RBP5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 ASAH2Q9NR71 780 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 CHRAC1Q9NRG0 131 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 ZNF277Q9NRM2 450 aaPredicted RBP5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 GKN1Q9NS71 199 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 DDX28Q9NUL7 540 aaKnown RBP5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 INTS7Q9NVH2 962 aaKnown RBP5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 MED9Q9NWA0 146 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 FAM118AQ9NWS6 357 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 CMTM6Q9NX76 183 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 MRPL39Q9NYK5 338 aaKnown RBP5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 GPRC5BQ9NZH0 403 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 ADA2Q9NZK5 511 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 GABBR1Q9UBS5 961 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 ADGRE2Q9UHX3 823 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 ZDHHC2Q9UIJ5 367 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 ACAD8Q9UKU7 415 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 TMCC3Q9ULS5 477 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 CDYLQ9Y232 598 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 ANKRD6Q9Y2G4 727 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 PCDHA9Q9Y5H5 950 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 GMPPBQ9Y5P6 360 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 FKBP7Q9Y680 259 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 RNF215Q9Y6U7 377 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 ZNFX1Q9P2E3 1918 aaKnown RBP5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 BAZ2AQ9UIF9 1905 aaKnown RBP5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 DOT1LQ8TEK3 1739 aa5.22□□□□□ -1.57
LSM3P2-201ENST00000551246 ARFGEF1Q9Y6D6 1849 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms