RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 RDH11Q8TC12 318 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 ADAMTS15Q8TE58 950 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 C10orf82Q8WW14 230 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 ZFRQ96KR1 1074 aaKnown RBP12.02□□□□□ -0.49
NR4A1-215ENST00000550557 JSRP1Q96MG2 331 aaPredicted RBP12.02□□□□□ -0.49
NR4A1-215ENST00000550557 ZNF180Q9UJW8 692 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 A0A0D9SEW6 157 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 SAC3D1A6NKF1 404 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 PRAMEF11O60813 436 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 TMEM63AO94886 807 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 JUNDP17535 347 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 TYRP1P17643 537 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 GNAZP19086 355 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 RPL26P61254 145 aaKnown RBP12.02□□□□□ -0.49
NR4A1-215ENST00000550557 CHIT1Q13231 466 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 TDGQ13569 410 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 SIM2Q14190 667 aaPredicted RBP12.02□□□□□ -0.49
NR4A1-215ENST00000550557 ACAP2Q15057 778 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 CST6Q15828 149 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 Q6ZVL8 140 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 ZC3H7AQ8IWR0 971 aaKnown RBP12.02□□□□□ -0.49
NR4A1-215ENST00000550557 TMEM145Q8NBT3 493 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 FBXO15Q8NCQ5 510 aaPredicted RBP12.02□□□□□ -0.49
NR4A1-215ENST00000550557 RPLP0P6Q8NHW5 317 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 MAPK15Q8TD08 544 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 APOLD1Q96LR9 279 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 NMUR2Q9GZQ4 415 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 SLCO3A1Q9UIG8 710 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 SERTAD3Q9UJW9 196 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 CNTN6Q9UQ52 1028 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 N6AMT1Q9Y5N5 214 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 SNX13Q9Y5W8 968 aa12.02□□□□□ -0.49
NR4A1-215ENST00000550557 DPPA5A6NC42 116 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 HIDE1A8MVS5 230 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 LILRB3O75022 631 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 APBB3O95704 486 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 SRPRAP08240 638 aaKnown RBP12.01□□□□□ -0.49
NR4A1-215ENST00000550557 CCNYL3P0C7X3 344 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 HSPA7P48741 367 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 TRAF2Q12933 501 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 C1orf61Q13536 156 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 ZFP1Q6P2D0 407 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 PRMT9Q6P2P2 845 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 RNF44Q7L0R7 432 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 C1orf74Q96LT6 269 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 TUBGCP5Q96RT8 1024 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 C12orf65Q9H3J6 166 aaKnown RBP12.01□□□□□ -0.49
NR4A1-215ENST00000550557 C2orf71A6NGG8 1288 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 TMEM189-UBE2V1I3L0A0 370 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 TNFAIP8O95379 198 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 HNRNPLP14866 589 aaKnown RBP eCLIP12.01□□□□□ -0.49
NR4A1-215ENST00000550557 VAV1P15498 845 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 NMBRP28336 390 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 POLD2P49005 469 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 HNRNPKP61978 463 aaKnown RBP eCLIP12.01□□□□□ -0.49
NR4A1-215ENST00000550557 C14orf80Q86SX3 495 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 RELL1Q8IUW5 271 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 TFGQ92734 400 aaPredicted RBP12.01□□□□□ -0.49
NR4A1-215ENST00000550557 CCM2Q9BSQ5 444 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 CADM1Q9BY67 442 aaKnown RBP12.01□□□□□ -0.49
NR4A1-215ENST00000550557 EXOSC4Q9NPD3 245 aaKnown RBP12.01□□□□□ -0.49
NR4A1-215ENST00000550557 ITM2CQ9NQX7 267 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 NUDT4Q9NZJ9 180 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 CFAP20Q9Y6A4 193 aaKnown RBP12.01□□□□□ -0.49
NR4A1-215ENST00000550557 DLEC1Q9Y238 1755 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 CCDC162PA2VCL2 907 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 FAM221BA6H8Z2 402 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 B3GALT2O43825 422 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 ERVFC1P60507 584 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 BNC1Q01954 994 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 DEPDC1Q5TB30 811 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 AAGABQ6PD74 315 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 COMMD2Q86X83 199 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 SNX32Q86XE0 403 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 CYP4Z2PQ8N1L4 340 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 ZNF563Q8TA94 476 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 MIPEPQ99797 713 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 RHBDL2Q9NX52 303 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 APOBEC3BQ9UH17 382 aaKnown RBP12.01□□□□□ -0.49
NR4A1-215ENST00000550557 AP3M1Q9Y2T2 418 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 PLLPQ9Y342 182 aa12.01□□□□□ -0.49
NR4A1-215ENST00000550557 BEST1O76090 585 aa12□□□□□ -0.49
NR4A1-215ENST00000550557 KCNH1O95259 989 aa12□□□□□ -0.49
NR4A1-215ENST00000550557 CLDN9O95484 217 aa12□□□□□ -0.49
NR4A1-215ENST00000550557 C5AR1P21730 350 aa12□□□□□ -0.49
NR4A1-215ENST00000550557 GKP32189 559 aa12□□□□□ -0.49
NR4A1-215ENST00000550557 CHN2P52757 468 aa12□□□□□ -0.49
NR4A1-215ENST00000550557 SIX1Q15475 284 aaPredicted RBP12□□□□□ -0.49
NR4A1-215ENST00000550557 KHDC1Q4VXA5 237 aaKnown RBP12□□□□□ -0.49
NR4A1-215ENST00000550557 TTC9BQ8N6N2 239 aa12□□□□□ -0.49
NR4A1-215ENST00000550557 GLIS1Q8NBF1 620 aa12□□□□□ -0.49
NR4A1-215ENST00000550557 SIDT2Q8NBJ9 832 aaKnown RBP12□□□□□ -0.49
NR4A1-215ENST00000550557 ACTRT2Q8TDY3 377 aa12□□□□□ -0.49
NR4A1-215ENST00000550557 DENND1AQ8TEH3 1009 aa12□□□□□ -0.49
NR4A1-215ENST00000550557 HHIPQ96QV1 700 aa12□□□□□ -0.49
NR4A1-215ENST00000550557 PANX1Q96RD7 426 aa12□□□□□ -0.49
NR4A1-215ENST00000550557 LINC00597Q9H2U6 94 aa12□□□□□ -0.49
NR4A1-215ENST00000550557 IPPKQ9H8X2 491 aa12□□□□□ -0.49
NR4A1-215ENST00000550557 INTS10Q9NVR2 710 aaKnown RBP12□□□□□ -0.49
NR4A1-215ENST00000550557 A0A0J9YVX5 310 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms