RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 TTLL8A6PVC2 850 aa21.1■□□□□ 0.97
SMARCC2-210ENST00000550519 AKR1B15C9JRZ8 316 aaPredicted RBP21.1■□□□□ 0.97
SMARCC2-210ENST00000550519 H7C0C1 242 aa21.1■□□□□ 0.97
SMARCC2-210ENST00000550519 MEN1O00255 615 aa21.1■□□□□ 0.97
SMARCC2-210ENST00000550519 RAB40ALP0C0E4 278 aa21.1■□□□□ 0.97
SMARCC2-210ENST00000550519 MAGEA1P43355 309 aa21.1■□□□□ 0.97
SMARCC2-210ENST00000550519 ATP5OP48047 213 aa21.1■□□□□ 0.97
SMARCC2-210ENST00000550519 PRLHRP49683 370 aa21.1■□□□□ 0.97
SMARCC2-210ENST00000550519 CCL11P51671 97 aa21.1■□□□□ 0.97
SMARCC2-210ENST00000550519 PGDP52209 483 aa21.1■□□□□ 0.97
SMARCC2-210ENST00000550519 PRKAA1Q13131 559 aa21.1■□□□□ 0.97
SMARCC2-210ENST00000550519 TBX2Q13207 712 aaPredicted RBP21.1■□□□□ 0.97
SMARCC2-210ENST00000550519 OLIG2Q13516 323 aa21.1■□□□□ 0.97
SMARCC2-210ENST00000550519 ITPRIPL1Q6GPH6 555 aa21.1■□□□□ 0.97
SMARCC2-210ENST00000550519 LCN10Q6JVE6 187 aa21.1■□□□□ 0.97
SMARCC2-210ENST00000550519 DSELQ8IZU8 1212 aa21.1■□□□□ 0.97
SMARCC2-210ENST00000550519 HM13Q8TCT9 377 aa21.1■□□□□ 0.97
SMARCC2-210ENST00000550519 CPT1BQ92523 772 aa21.1■□□□□ 0.97
SMARCC2-210ENST00000550519 KRT35Q92764 455 aa21.1■□□□□ 0.97
SMARCC2-210ENST00000550519 TLR10Q9BXR5 811 aa21.1■□□□□ 0.97
SMARCC2-210ENST00000550519 ACSS2Q9NR19 701 aa21.1■□□□□ 0.97
SMARCC2-210ENST00000550519 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.1■□□□□ 0.97
SMARCC2-210ENST00000550519 C17orf113A0A1B0GUU1 675 aa21.09■□□□□ 0.97
SMARCC2-210ENST00000550519 BLACEA4D250 179 aa21.09■□□□□ 0.97
SMARCC2-210ENST00000550519 SLC9B1P1A6NJY1 282 aa21.09■□□□□ 0.97
SMARCC2-210ENST00000550519 MATN2O00339 956 aa21.09■□□□□ 0.97
SMARCC2-210ENST00000550519 MSL3P1P0C860 447 aa21.09■□□□□ 0.97
SMARCC2-210ENST00000550519 RALBP11234 206 aa21.09■□□□□ 0.97
SMARCC2-210ENST00000550519 RORAP35398 523 aa21.09■□□□□ 0.97
SMARCC2-210ENST00000550519 PTGIRP43119 386 aa21.09■□□□□ 0.97
SMARCC2-210ENST00000550519 UQCRFS1P47985 274 aa21.09■□□□□ 0.97
SMARCC2-210ENST00000550519 ABRQ12979 859 aa21.09■□□□□ 0.97
SMARCC2-210ENST00000550519 C11orf63Q6NUN7 778 aa21.09■□□□□ 0.97
SMARCC2-210ENST00000550519 NXPE1Q8N323 547 aa21.09■□□□□ 0.97
SMARCC2-210ENST00000550519 GALNT11Q8NCW6 608 aa21.09■□□□□ 0.97
SMARCC2-210ENST00000550519 ACVR1CQ8NER5 493 aa21.09■□□□□ 0.97
SMARCC2-210ENST00000550519 OR13C4Q8NGS5 318 aa21.09■□□□□ 0.97
SMARCC2-210ENST00000550519 CPT1CQ8TCG5 803 aa21.09■□□□□ 0.97
SMARCC2-210ENST00000550519 ULK4Q96C45 1275 aa21.09■□□□□ 0.97
SMARCC2-210ENST00000550519 DCUN1D1Q96GG9 259 aa21.09■□□□□ 0.97
SMARCC2-210ENST00000550519 C19orf43Q9BQ61 176 aa21.09■□□□□ 0.97
SMARCC2-210ENST00000550519 APOL2Q9BQE5 337 aa21.09■□□□□ 0.97
SMARCC2-210ENST00000550519 SYTL2Q9HCH5 934 aa21.09■□□□□ 0.97
SMARCC2-210ENST00000550519 CRLS1Q9UJA2 301 aa21.09■□□□□ 0.97
SMARCC2-210ENST00000550519 AAR2Q9Y312 384 aaKnown RBP21.09■□□□□ 0.97
SMARCC2-210ENST00000550519 SPTBN1Q01082 2364 aaKnown RBP21.09■□□□□ 0.97
SMARCC2-210ENST00000550519 UTP20O75691 2785 aaKnown RBP21.08■□□□□ 0.97
SMARCC2-210ENST00000550519 VPS4BO75351 444 aa21.08■□□□□ 0.97
SMARCC2-210ENST00000550519 CEACAM4O75871 244 aa21.08■□□□□ 0.97
SMARCC2-210ENST00000550519 CRTAMO95727 393 aa21.08■□□□□ 0.97
SMARCC2-210ENST00000550519 CAPN1P07384 714 aa21.08■□□□□ 0.97
SMARCC2-210ENST00000550519 ATP1B2P14415 290 aaPredicted RBP21.08■□□□□ 0.97
SMARCC2-210ENST00000550519 CDH3P22223 829 aa21.08■□□□□ 0.97
SMARCC2-210ENST00000550519 PSMB4P28070 264 aa21.08■□□□□ 0.97
SMARCC2-210ENST00000550519 KRT33BQ14525 404 aa21.08■□□□□ 0.97
SMARCC2-210ENST00000550519 NADK2Q4G0N4 442 aa21.08■□□□□ 0.97
SMARCC2-210ENST00000550519 ZNF789Q5FWF6 425 aa21.08■□□□□ 0.97
SMARCC2-210ENST00000550519 ANKRD20A2Q5SQ80 823 aa21.08■□□□□ 0.97
SMARCC2-210ENST00000550519 ANKRD20A1Q5TYW2 823 aa21.08■□□□□ 0.97
SMARCC2-210ENST00000550519 ANKRD20A3Q5VUR7 823 aa21.08■□□□□ 0.97
SMARCC2-210ENST00000550519 EFCAB3Q8N7B9 438 aa21.08■□□□□ 0.97
SMARCC2-210ENST00000550519 ENDOVQ8N8Q3 282 aaKnown RBP21.08■□□□□ 0.97
SMARCC2-210ENST00000550519 ACTL9Q8TC94 416 aa21.08■□□□□ 0.97
SMARCC2-210ENST00000550519 LCN9Q8WX39 176 aa21.08■□□□□ 0.97
SMARCC2-210ENST00000550519 COPS8Q99627 209 aa21.08■□□□□ 0.97
SMARCC2-210ENST00000550519 NLNQ9BYT8 704 aa21.08■□□□□ 0.97
SMARCC2-210ENST00000550519 FANCEQ9HB96 536 aa21.08■□□□□ 0.97
SMARCC2-210ENST00000550519 TCFL5Q9UL49 500 aa21.08■□□□□ 0.97
SMARCC2-210ENST00000550519 VPS4AQ9UN37 437 aa21.08■□□□□ 0.97
SMARCC2-210ENST00000550519 MED13Q9UHV7 2174 aa21.07■□□□□ 0.96
SMARCC2-210ENST00000550519 DDX3YO15523 660 aaKnown RBP21.07■□□□□ 0.96
SMARCC2-210ENST00000550519 SORBS2O94875 1100 aaKnown RBP21.07■□□□□ 0.96
SMARCC2-210ENST00000550519 LCA5LO95447 670 aa21.07■□□□□ 0.96
SMARCC2-210ENST00000550519 PRDX3P30048 256 aaKnown RBP21.07■□□□□ 0.96
SMARCC2-210ENST00000550519 ZNF140P52738 457 aaPredicted RBP21.07■□□□□ 0.96
SMARCC2-210ENST00000550519 COPS2P61201 443 aa21.07■□□□□ 0.96
SMARCC2-210ENST00000550519 OTUD4Q01804 1114 aaKnown RBP21.07■□□□□ 0.96
SMARCC2-210ENST00000550519 ZNF658BQ4V348 819 aaPredicted RBP21.07■□□□□ 0.96
SMARCC2-210ENST00000550519 DENND5AQ6IQ26 1287 aa21.07■□□□□ 0.96
SMARCC2-210ENST00000550519 SNX20Q7Z614 316 aa21.07■□□□□ 0.96
SMARCC2-210ENST00000550519 OR1L3Q8NH93 324 aa21.07■□□□□ 0.96
SMARCC2-210ENST00000550519 HEXDCQ8WVB3 486 aa21.07■□□□□ 0.96
SMARCC2-210ENST00000550519 FERMT1Q9BQL6 677 aa21.07■□□□□ 0.96
SMARCC2-210ENST00000550519 PITPNM3Q9BZ71 974 aa21.07■□□□□ 0.96
SMARCC2-210ENST00000550519 OR52A5Q9H2C5 316 aa21.07■□□□□ 0.96
SMARCC2-210ENST00000550519 SRMSQ9H3Y6 488 aa21.07■□□□□ 0.96
SMARCC2-210ENST00000550519 LRRC4CQ9HCJ2 640 aa21.07■□□□□ 0.96
SMARCC2-210ENST00000550519 PCMTD2Q9NV79 361 aa21.07■□□□□ 0.96
SMARCC2-210ENST00000550519 SNX7Q9UNH6 387 aa21.07■□□□□ 0.96
SMARCC2-210ENST00000550519 TFR2Q9UP52 801 aa21.07■□□□□ 0.96
SMARCC2-210ENST00000550519 EFR3BQ9Y2G0 817 aa21.07■□□□□ 0.96
SMARCC2-210ENST00000550519 MAP4K5Q9Y4K4 846 aa21.07■□□□□ 0.96
SMARCC2-210ENST00000550519 PCDHGB7Q9Y5F8 929 aa21.07■□□□□ 0.96
SMARCC2-210ENST00000550519 IGLV3-16A0A075B6K0 115 aa21.06■□□□□ 0.96
SMARCC2-210ENST00000550519 CCDC66A2RUB6 948 aa21.06■□□□□ 0.96
SMARCC2-210ENST00000550519 CFAP99D6REC4 459 aa21.06■□□□□ 0.96
SMARCC2-210ENST00000550519 BTN3A3O00478 584 aa21.06■□□□□ 0.96
SMARCC2-210ENST00000550519 ITGALP20701 1170 aa21.06■□□□□ 0.96
SMARCC2-210ENST00000550519 GNLYP22749 145 aa21.06■□□□□ 0.96
SMARCC2-210ENST00000550519 HADHAP40939 763 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms