RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 E7ESA3 106 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 SLC25A14O95258 325 aaPredicted RBP15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 SIX3O95343 332 aaPredicted RBP15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 CCNYL3P0C7X3 344 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 MAPK12P53778 367 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 DNAJB8Q8NHS0 232 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 UTP4Q969X6 686 aaKnown RBP15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 GPR22Q99680 433 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 FAIM2Q9BWQ8 316 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 NEK6Q9HC98 313 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 UCKL1Q9NWZ5 548 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 GULP1Q9UBP9 304 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 FUOMA2VDF0 154 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 ECDO95905 644 aaPredicted RBP15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 IFNA7P01567 189 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 IVDP26440 423 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 PFKPQ01813 784 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 ACOX1Q15067 660 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 IQCCQ4KMZ1 466 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 CATSPERGQ6ZRH7 1159 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 FAM220AQ7Z4H9 259 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 HDAC2Q92769 488 aaKnown RBP15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 C8orf48Q96LL4 319 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 NIFKQ9BYG3 293 aaKnown RBP15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 MMP27Q9H306 513 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 HMX1Q9NP08 348 aaPredicted RBP15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 STARD7Q9NQZ5 370 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 A0A1W2PP18 115 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 MAGEB17A8MXT2 336 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 GPR25O00155 361 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 MSI1O43347 362 aaKnown RBP15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 GOT2P00505 430 aaKnown RBP15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 F7P08709 466 aaPredicted RBP15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 DNAJA1P31689 397 aaKnown RBP15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 EPHB3P54753 998 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 RPS14P62263 151 aaKnown RBP15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 CXorf57Q6NSI4 855 aaKnown RBP15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 CCDC28AQ8IWP9 274 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 NLGN2Q8NFZ4 835 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 DDX1Q92499 740 aaKnown RBP15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 AARSD1Q9BTE6 412 aaKnown RBP15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 TFB2MQ9H5Q4 396 aaKnown RBP15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 ASB3Q9Y575 518 aa15.58■□□□□ 0.08
RBFOX1-212ENST00000550418 SETD1AO15047 1707 aaKnown RBP15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 ITPKAP23677 461 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 RELAQ04206 551 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 TEAD4Q15561 434 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 IFI44LQ53G44 452 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 PLEKHG4Q58EX7 1191 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 RABL3Q5HYI8 236 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 PRR23CQ6ZRP0 262 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 POF1BQ8WVV4 589 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 HERC2P3Q9BVR0 1158 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 EIF3KQ9UBQ5 218 aaKnown RBP15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 CDC14AQ9UNH5 594 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 H0YAE9 185 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 SCAMP3O14828 347 aaKnown RBP15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 SLC2A2P11168 524 aaPredicted RBP15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 ABRQ12979 859 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 CRELD1Q96HD1 420 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 ART5Q96L15 291 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 ADAMTS10Q9H324 1103 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 SEMA3GQ9NS98 782 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 DNAJC11Q9NVH1 559 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 HSPB11Q9Y547 144 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 PCDHGB3Q9Y5G1 929 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 PSAT1Q9Y617 370 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 PLIN4Q96Q06 1357 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 COL1A1P02452 1464 aaPredicted RBP15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 MYCLP1P12525 358 aaPredicted RBP15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 CD72P21854 359 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 HTR7P34969 479 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 GUCA1AP43080 201 aaPredicted RBP15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 MANFP55145 182 aaKnown RBP15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 TAS2R41P59536 307 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 CERS6Q6ZMG9 384 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 ATP13A3Q9H7F0 1226 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 ZIM2Q9NZV7 527 aa15.57■□□□□ 0.08
RBFOX1-212ENST00000550418 AHSGP02765 367 aa15.56■□□□□ 0.08
RBFOX1-212ENST00000550418 SLC6A4P31645 630 aa15.56■□□□□ 0.08
RBFOX1-212ENST00000550418 ARL4DP49703 201 aa15.56■□□□□ 0.08
RBFOX1-212ENST00000550418 PEG10Q86TG7 708 aaKnown RBP15.56■□□□□ 0.08
RBFOX1-212ENST00000550418 MON1AQ86VX9 555 aa15.56■□□□□ 0.08
RBFOX1-212ENST00000550418 COLGALT2Q8IYK4 626 aa15.56■□□□□ 0.08
RBFOX1-212ENST00000550418 PIWIL1Q96J94 861 aaKnown RBP15.56■□□□□ 0.08
RBFOX1-212ENST00000550418 SLC30A2Q9BRI3 323 aa15.56■□□□□ 0.08
RBFOX1-212ENST00000550418 C11orf16Q9NQ32 467 aa15.56■□□□□ 0.08
RBFOX1-212ENST00000550418 ADAMTSL3P82987 1691 aa15.56■□□□□ 0.08
RBFOX1-212ENST00000550418 XPNPEP2O43895 674 aa15.56■□□□□ 0.08
RBFOX1-212ENST00000550418 ERN1O75460 977 aaKnown RBP15.56■□□□□ 0.08
RBFOX1-212ENST00000550418 OR6A2O95222 327 aa15.56■□□□□ 0.08
RBFOX1-212ENST00000550418 SNAP29O95721 258 aa15.56■□□□□ 0.08
RBFOX1-212ENST00000550418 CCR10P46092 362 aa15.56■□□□□ 0.08
RBFOX1-212ENST00000550418 MAB21L1Q13394 359 aa15.56■□□□□ 0.08
RBFOX1-212ENST00000550418 HNRNPDQ14103 355 aaKnown RBP15.56■□□□□ 0.08
RBFOX1-212ENST00000550418 SETMARQ53H47 684 aaPredicted RBP15.56■□□□□ 0.08
RBFOX1-212ENST00000550418 OLFML2AQ68BL7 652 aa15.56■□□□□ 0.08
RBFOX1-212ENST00000550418 NCBP2-AS2Q69YL0 99 aa15.56■□□□□ 0.08
RBFOX1-212ENST00000550418 OR2T5Q6IEZ7 315 aa15.56■□□□□ 0.08
RBFOX1-212ENST00000550418 TAF8Q7Z7C8 310 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms