RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-223ENST00000550160 MRPL40Q9NQ50 206 aaKnown RBP11.39□□□□□ -0.59
CNOT2-223ENST00000550160 KLC4Q9NSK0 619 aa11.39□□□□□ -0.59
CNOT2-223ENST00000550160 TMEM216Q9P0N5 145 aa11.39□□□□□ -0.59
CNOT2-223ENST00000550160 SLC17A7Q9P2U7 560 aa11.39□□□□□ -0.59
CNOT2-223ENST00000550160 TSR3Q9UJK0 312 aaKnown RBP11.39□□□□□ -0.59
CNOT2-223ENST00000550160 RNF112Q9ULX5 631 aa11.39□□□□□ -0.59
CNOT2-223ENST00000550160 DNAJC16Q9Y2G8 782 aa11.39□□□□□ -0.59
CNOT2-223ENST00000550160 PCDHGA4Q9Y5G9 962 aa11.39□□□□□ -0.59
CNOT2-223ENST00000550160 ZDBF2Q9HCK1 2354 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 NPEPPSL1A6NEC2 478 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 PDZK1P1A8MUH7 402 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 POLR3GO15318 223 aaPredicted RBP11.38□□□□□ -0.59
CNOT2-223ENST00000550160 SLC16A5O15375 505 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 KERAO60938 352 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 SMIM24O75264 130 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 TOP3BO95985 862 aaKnown RBP11.38□□□□□ -0.59
CNOT2-223ENST00000550160 CATP04040 527 aaKnown RBP11.38□□□□□ -0.59
CNOT2-223ENST00000550160 PROCP04070 461 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 RPN2P04844 631 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 ENO2P09104 434 aaPredicted RBP11.38□□□□□ -0.59
CNOT2-223ENST00000550160 HIST1H2AGP0C0S8 130 aaPredicted RBP11.38□□□□□ -0.59
CNOT2-223ENST00000550160 TPBGLP0DKB5 382 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 MYL2P10916 166 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 CPA3P15088 417 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 CHN1P15882 459 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 HIST1H2ADP20671 130 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 CYP2A7P20853 494 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 ITPKAP23677 461 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 MAP4P27816 1152 aaKnown RBP11.38□□□□□ -0.59
CNOT2-223ENST00000550160 PREPP48147 710 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 ATP1A2P50993 1020 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 CLCNKAP51800 687 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 NXPH1P58417 271 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 IRX4P78413 519 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 DLG1Q12959 904 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 FZD2Q14332 565 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 NFE2L1Q14494 772 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 TSNQ15631 228 aaKnown RBP11.38□□□□□ -0.59
CNOT2-223ENST00000550160 TUBB8Q3ZCM7 444 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 TECRLQ5HYJ1 363 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 METRNLQ641Q3 311 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 TTC23LQ6PF05 361 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 PRR23BQ6ZRT6 265 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 PIWIL4Q7Z3Z4 852 aaKnown RBP11.38□□□□□ -0.59
CNOT2-223ENST00000550160 ISCA2Q86U28 154 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 PDZD3Q86UT5 571 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 SYT12Q8IV01 421 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 TRIM42Q8IWZ5 723 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 C1orf216Q8TAB5 229 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 MAGEC3Q8TD91 643 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 HIST1H2AHQ96KK5 128 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 GPR78Q96P69 363 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 PRRX2Q99811 253 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 HIST1H2AJQ99878 128 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 H2AFJQ9BTM1 129 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 COL25A1Q9BXS0 654 aaPredicted RBP11.38□□□□□ -0.59
CNOT2-223ENST00000550160 GSDMCQ9BYG8 508 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 UNKQ9C0B0 810 aaKnown RBP11.38□□□□□ -0.59
CNOT2-223ENST00000550160 ZNF358Q9NW07 568 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 DNAJC28Q9NX36 388 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 XPR1Q9UBH6 696 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 RAB23Q9ULC3 237 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 TMCO1Q9UM00 188 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 KCNK6Q9Y257 313 aa11.38□□□□□ -0.59
CNOT2-223ENST00000550160 DOCK9Q9BZ29 2069 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 COL6A3P12111 3177 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 SUPT3HB4E1H0 165 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 TK2O00142 265 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 CDC7O00311 574 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 GPR37O15354 613 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 BIRC5O15392 142 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 SNX2O60749 519 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 SUPT3HO75486 399 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 FUCA1P04066 466 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 WNT1P04628 370 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 SLC2A4P14672 509 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 JUNDP17535 347 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 GMPRP36959 345 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 HALP42357 657 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 CSNK1EP49674 416 aaKnown RBP11.37□□□□□ -0.59
CNOT2-223ENST00000550160 HNRNPKP61978 463 aaKnown RBP eCLIP11.37□□□□□ -0.59
CNOT2-223ENST00000550160 CTBSQ01459 385 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 EIF2B5Q13144 721 aaKnown RBP11.37□□□□□ -0.59
CNOT2-223ENST00000550160 ZNF658BQ4V348 819 aaPredicted RBP11.37□□□□□ -0.59
CNOT2-223ENST00000550160 TPRG1LQ5T0D9 272 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 C16orf46Q6P387 395 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 UNC5DQ6UXZ4 953 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 ZYG11AQ6WRX3 759 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 RAB44Q7Z6P3 723 aaPredicted RBP11.37□□□□□ -0.59
CNOT2-223ENST00000550160 GPSM1Q86YR5 675 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 SLC22A9Q8IVM8 553 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 PPP1R14CQ8TAE6 165 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 CEP76Q8TAP6 659 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 MDM1Q8TC05 714 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 MCOLN3Q8TDD5 553 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 DENND1AQ8TEH3 1009 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 PIGKQ92643 395 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 PTERQ96BW5 349 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 TM7SF3Q9NS93 570 aa11.37□□□□□ -0.59
CNOT2-223ENST00000550160 CPSF2Q9P2I0 782 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms