RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 PIP4K2AP48426 406 aaPredicted RBP3.61□□□□□ -1.83
CNOT2-216ENST00000548939 NR2C2P49116 596 aa3.61□□□□□ -1.83
CNOT2-216ENST00000548939 MLLT10P55197 1068 aa3.61□□□□□ -1.83
CNOT2-216ENST00000548939 CLDN20P56880 219 aa3.61□□□□□ -1.83
CNOT2-216ENST00000548939 UFM1P61960 85 aa3.61□□□□□ -1.83
CNOT2-216ENST00000548939 ZNF239Q16600 458 aaKnown RBP3.61□□□□□ -1.83
CNOT2-216ENST00000548939 USP41Q3LFD5 358 aa3.61□□□□□ -1.83
CNOT2-216ENST00000548939 CACNA2D4Q7Z3S7 1137 aa3.61□□□□□ -1.83
CNOT2-216ENST00000548939 PIWIL4Q7Z3Z4 852 aaKnown RBP3.61□□□□□ -1.83
CNOT2-216ENST00000548939 P2RY8Q86VZ1 359 aa3.61□□□□□ -1.83
CNOT2-216ENST00000548939 ANKRD52Q8NB46 1076 aa3.61□□□□□ -1.83
CNOT2-216ENST00000548939 SLC44A1Q8WWI5 657 aa3.61□□□□□ -1.83
CNOT2-216ENST00000548939 APBB2Q92870 758 aa3.61□□□□□ -1.83
CNOT2-216ENST00000548939 SENP5Q96HI0 755 aaPredicted RBP3.61□□□□□ -1.83
CNOT2-216ENST00000548939 KLHL15Q96M94 604 aa3.61□□□□□ -1.83
CNOT2-216ENST00000548939 VGLL1Q99990 258 aa3.61□□□□□ -1.83
CNOT2-216ENST00000548939 RAD21L1Q9H4I0 556 aa3.61□□□□□ -1.83
CNOT2-216ENST00000548939 DBNDD1Q9H9R9 158 aa3.61□□□□□ -1.83
CNOT2-216ENST00000548939 RPS10P5Q9NQ39 176 aa3.61□□□□□ -1.83
CNOT2-216ENST00000548939 NCOR1O75376 2440 aa3.61□□□□□ -1.83
CNOT2-216ENST00000548939 SCN7AQ01118 1682 aa3.6□□□□□ -1.83
CNOT2-216ENST00000548939 OR5K3A6NET4 321 aa3.6□□□□□ -1.83
CNOT2-216ENST00000548939 YDJCA8MPS7 323 aa3.6□□□□□ -1.83
CNOT2-216ENST00000548939 H7C423 109 aa3.6□□□□□ -1.83
CNOT2-216ENST00000548939 TSHBP01222 138 aa3.6□□□□□ -1.83
CNOT2-216ENST00000548939 HOXB5P09067 269 aa3.6□□□□□ -1.83
CNOT2-216ENST00000548939 CCL5P13501 91 aa3.6□□□□□ -1.83
CNOT2-216ENST00000548939 COX7A2P14406 83 aa3.6□□□□□ -1.83
CNOT2-216ENST00000548939 MRPS5P82675 430 aaKnown RBP3.6□□□□□ -1.83
CNOT2-216ENST00000548939 UBE3AQ05086 875 aa3.6□□□□□ -1.83
CNOT2-216ENST00000548939 C6orf141Q5SZD1 244 aa3.6□□□□□ -1.83
CNOT2-216ENST00000548939 RBM15BQ8NDT2 890 aaKnown RBP3.6□□□□□ -1.83
CNOT2-216ENST00000548939 RAET1EQ8TD07 263 aa3.6□□□□□ -1.83
CNOT2-216ENST00000548939 DNAAF4Q8WXU2 420 aa3.6□□□□□ -1.83
CNOT2-216ENST00000548939 PHF21AQ96BD5 680 aa3.6□□□□□ -1.83
CNOT2-216ENST00000548939 ZSCAN31Q96LW9 406 aaPredicted RBP3.6□□□□□ -1.83
CNOT2-216ENST00000548939 ZBTB20Q9HC78 741 aaPredicted RBP3.6□□□□□ -1.83
CNOT2-216ENST00000548939 AAR2Q9Y312 384 aaKnown RBP3.6□□□□□ -1.83
CNOT2-216ENST00000548939 A6NL46 340 aa3.59□□□□□ -1.83
CNOT2-216ENST00000548939 USP17L23D6RBM5 183 aa3.59□□□□□ -1.83
CNOT2-216ENST00000548939 WDHD1O75717 1129 aaPredicted RBP3.59□□□□□ -1.83
CNOT2-216ENST00000548939 CEACAM1P13688 526 aa3.59□□□□□ -1.83
CNOT2-216ENST00000548939 NR2F2P24468 414 aa3.59□□□□□ -1.83
CNOT2-216ENST00000548939 RPS12P25398 132 aaKnown RBP3.59□□□□□ -1.83
CNOT2-216ENST00000548939 KRT9P35527 623 aa3.59□□□□□ -1.83
CNOT2-216ENST00000548939 APOBEC1P41238 236 aaKnown RBP3.59□□□□□ -1.83
CNOT2-216ENST00000548939 UBXN2AP68543 259 aa3.59□□□□□ -1.83
CNOT2-216ENST00000548939 MBTD1Q05BQ5 628 aa3.59□□□□□ -1.83
CNOT2-216ENST00000548939 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.59□□□□□ -1.83
CNOT2-216ENST00000548939 TUBB2AQ13885 445 aa3.59□□□□□ -1.83
CNOT2-216ENST00000548939 EIF4A2Q14240 407 aaKnown RBP3.59□□□□□ -1.83
CNOT2-216ENST00000548939 COL28A1Q2UY09 1125 aa3.59□□□□□ -1.83
CNOT2-216ENST00000548939 METTL7BQ6UX53 244 aa3.59□□□□□ -1.83
CNOT2-216ENST00000548939 FGFBP3Q8TAT2 258 aa3.59□□□□□ -1.83
CNOT2-216ENST00000548939 U2AF1L4Q8WU68 220 aaKnown RBP3.59□□□□□ -1.83
CNOT2-216ENST00000548939 TMEM47Q9BQJ4 181 aa3.59□□□□□ -1.83
CNOT2-216ENST00000548939 TRIM51Q9BSJ1 452 aa3.59□□□□□ -1.83
CNOT2-216ENST00000548939 PCGF1Q9BSM1 259 aa3.59□□□□□ -1.83
CNOT2-216ENST00000548939 MCRIP2Q9BUT9 160 aaKnown RBP3.59□□□□□ -1.83
CNOT2-216ENST00000548939 TUBB2BQ9BVA1 445 aa3.59□□□□□ -1.83
CNOT2-216ENST00000548939 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.83
CNOT2-216ENST00000548939 NYXQ9GZU5 481 aa3.59□□□□□ -1.83
CNOT2-216ENST00000548939 USP44Q9H0E7 712 aa3.59□□□□□ -1.83
CNOT2-216ENST00000548939 BARHL2Q9NY43 387 aa3.59□□□□□ -1.83
CNOT2-216ENST00000548939 SLC25A10Q9UBX3 287 aaPredicted RBP3.59□□□□□ -1.83
CNOT2-216ENST00000548939 CDH23Q9H251 3354 aa3.59□□□□□ -1.83
CNOT2-216ENST00000548939 KIF24Q5T7B8 1368 aa3.59□□□□□ -1.83
CNOT2-216ENST00000548939 NCAPD2Q15021 1401 aa3.59□□□□□ -1.84
CNOT2-216ENST00000548939 PKD1L2Q7Z442 2459 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 MEIOCA2RUB1 952 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 TTC36A6NLP5 189 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 ANKRD28O15084 1053 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 KCNN4O15554 427 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 ECE2O60344 883 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 MSH3P20585 1137 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 MCCP23508 829 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 UBA7P41226 1012 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 TRAPPC10P48553 1259 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 MAD2L1Q13257 205 aaPredicted RBP3.58□□□□□ -1.84
CNOT2-216ENST00000548939 DRAP1Q14919 205 aaPredicted RBP3.58□□□□□ -1.84
CNOT2-216ENST00000548939 KIAA1644Q3SXP7 199 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 CRY2Q49AN0 593 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 TMEM31Q5JXX7 168 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 LCE3EQ5T5B0 92 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 FAM109BQ6ICB4 259 aaPredicted RBP3.58□□□□□ -1.84
CNOT2-216ENST00000548939 CLEC4GQ6UXB4 293 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 SH2D5Q6ZV89 423 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 NGEFQ8N5V2 710 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 RDM1Q8NG50 284 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 ZCCHC10Q8TBK6 192 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 ACOX2Q99424 681 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 RBM4BQ9BQ04 359 aaKnown RBP3.58□□□□□ -1.84
CNOT2-216ENST00000548939 PSD2Q9BQI7 771 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 CABLES2Q9BTV7 478 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 TEX13AQ9BXU3 409 aaPredicted RBP3.58□□□□□ -1.84
CNOT2-216ENST00000548939 ATP6V0A2Q9Y487 856 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 ABCC12Q96J65 1359 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 RIC1Q4ADV7 1423 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 ZDBF2Q9HCK1 2354 aa3.58□□□□□ -1.84
CNOT2-216ENST00000548939 C5orf60A6NFR6 353 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms