RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 SMPD3Q9NY59 655 aaPredicted RBP13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 GLYATL1P3A0A0U1RQE8 302 aa13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 UNCXA6NJT0 531 aa13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 BBIP1A8MTZ0 92 aa13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 TSPAN12O95859 305 aa13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 RPS17P08708 135 aaKnown RBP13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 HNF1BP35680 557 aa13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 NHSL2Q5HYW2 709 aa13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 AARS2Q5JTZ9 985 aaKnown RBP13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 CGREF1Q99674 301 aa13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 HIPK3Q9H422 1215 aa13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 IKZF5Q9H5V7 419 aa13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 ZNF696Q9H7X3 374 aa13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 IL26Q9NPH9 171 aa13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 PTTG2Q9NZH5 202 aa13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 NDUFA13Q9P0J0 144 aa13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 EIF3LQ9Y262 564 aaKnown RBP13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 PIKFYVEQ9Y2I7 2098 aa13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 GREB1Q4ZG55 1949 aa13.43□□□□□ -0.26
PRPF40B-209ENST00000548825 ILVBLA1L0T0 632 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 PRKD3O94806 890 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 C1QCP02747 245 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 GBAP04062 536 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 ABRQ12979 859 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 BNIP3Q12983 259 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 PMS2P3Q13401 168 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 AASDHQ4L235 1098 aaPredicted RBP13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 ZNF697Q5TEC3 545 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 FAM180BQ6P0A1 224 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 ITIH5Q86UX2 942 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 BBS7Q8IWZ6 715 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 GPR156Q8NFN8 814 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 CLSTN3Q9BQT9 956 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 CORO1BQ9BR76 489 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 BDH2Q9BUT1 245 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 HPS4Q9NQG7 708 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 ABCB8Q9NUT2 735 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 SLCO3A1Q9UIG8 710 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 DOLKQ9UPQ8 538 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 ATP11BQ9Y2G3 1177 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 CEPT1Q9Y6K0 416 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 MYO16Q9Y6X6 1858 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 TOR1BO14657 336 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 WDR47O94967 919 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 FGF4P08620 206 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 TCF3P15923 654 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 PTGER3P43115 390 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 PSMD7P51665 324 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 RPS6KA3P51812 740 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 RING1Q06587 406 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 BNIP2Q12982 314 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 SLC14A2Q15849 920 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 TYSND1Q2T9J0 566 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 CCSAPQ6IQ19 270 aaPredicted RBP13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 PRMT9Q6P2P2 845 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 ZDHHC13Q8IUH4 622 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 TFAP2CQ92754 450 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 C12orf43Q96C57 262 aaKnown RBP13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 ZDHHC4Q9NPG8 344 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 ELOVL2Q9NXB9 296 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 ARIH1Q9Y4X5 557 aaPredicted RBP13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 J3QRK9 145 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 hCG_2039718K7EN88 272 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 EPB42P16452 691 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 CD70P32970 193 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 RPIAP49247 311 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 DGKEP52429 567 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 ATP1A4Q13733 1029 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 RCAN2Q14206 197 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 FAM98BQ52LJ0 330 aaKnown RBP13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 PPP4R4Q6NUP7 873 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 ZNF621Q6ZSS3 439 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 ADAMTSL2Q86TH1 951 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 RGL4Q8IZJ4 473 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 MINDY1Q8N5J2 469 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 FBXL8Q96CD0 374 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 FAM120BQ96EK7 910 aaKnown RBP13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 MYRFLQ96LU7 910 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 FANCEQ9HB96 536 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 PCDH12Q9NPG4 1184 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 IL17CQ9P0M4 197 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 VPS9D1Q9Y2B5 631 aa13.42□□□□□ -0.26
PRPF40B-209ENST00000548825 A0A087WXM4 84 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 OTCP00480 354 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 ESR1P03372 595 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 ADARP55265 1226 aaKnown RBP13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 CACNG1Q06432 222 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 BTG3Q14201 252 aaPredicted RBP13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 TCEA2Q15560 299 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 MEP1AQ16819 746 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 RETSATQ6NUM9 610 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 ABRAXAS1Q6UWZ7 409 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 SERPINA13PQ6UXR4 307 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 CARM1Q86X55 608 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 ZFAND2BQ8WV99 257 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 SLC13A3Q8WWT9 602 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 TPD52L3Q96J77 140 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 LRRC3Q9BY71 257 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 AGPAT4Q9NRZ5 378 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 SRRDQ9UH36 339 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms